RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 RAB40ALP0C0E4 278 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 PRSS56P0CW18 603 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 TCP1P17987 556 aaKnown RBP16.21■□□□□ 0.19
USB1-211ENST00000565662 CXCR5P32302 372 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 GRIA1P42261 906 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 ITGA1P56199 1179 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 PPP1CAP62136 330 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 HSPA14Q0VDF9 509 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 GPS1Q13098 491 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 SRSF6Q13247 344 aaKnown RBP16.21■□□□□ 0.19
USB1-211ENST00000565662 KCNJ11Q14654 390 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 TYSND1Q2T9J0 566 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 IZUMO3Q5VZ72 239 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 CCDC137Q6PK04 289 aaKnown RBP16.21■□□□□ 0.19
USB1-211ENST00000565662 PCGF5Q86SE9 256 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 ADGRF3Q8IZF5 1079 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 C19orf47Q8N9M1 422 aaKnown RBP16.21■□□□□ 0.19
USB1-211ENST00000565662 GLIS1Q8NBF1 620 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 DHRS4Q9BTZ2 278 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 G3BP2Q9UN86 482 aaKnown RBP16.21■□□□□ 0.19
USB1-211ENST00000565662 COMMD10Q9Y6G5 202 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 PRSS21Q9Y6M0 314 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 KALRNO60229 2985 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 FAM237BA0A1B0GVD1 139 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 SLC9B1P1A6NJY1 282 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 C9J4A7 227 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 SMAPO00193 183 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 NDC80O14777 642 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 PHF2O75151 1096 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 CREG1O75629 220 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 CHRM5P08912 532 aaPredicted RBP16.2■□□□□ 0.18
USB1-211ENST00000565662 ZSCAN5DPP0CG00 497 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 ZNF28P17035 718 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 WT1P19544 449 aaPredicted RBP16.2■□□□□ 0.18
USB1-211ENST00000565662 AGXTP21549 392 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 AOAHP28039 575 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 TTLL9Q3SXZ7 439 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 CASC4Q6P4E1 433 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 ZNF517Q6ZMY9 492 aaPredicted RBP16.2■□□□□ 0.18
USB1-211ENST00000565662 OR5AR1Q8NGP9 310 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 PROKR1Q8TCW9 393 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 RAD51AP1Q96B01 352 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 ELMO2Q96JJ3 720 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 ZNF778Q96MU6 729 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 IP6K3Q96PC2 410 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 TRAPPC9Q96Q05 1148 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 CCDC68Q9H2F9 335 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 KLHL42Q9P2K6 505 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 ICKQ9UPZ9 632 aa16.2■□□□□ 0.18
USB1-211ENST00000565662 TDRKHQ9Y2W6 561 aaKnown RBP16.2■□□□□ 0.18
USB1-211ENST00000565662 SDR42E2A6NKP2 422 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 ZNF839A8K0R7 811 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 TMEM150CB9EJG8 249 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 MKRN2OSH3BPM6 223 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 J3QKU1 62 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 BTN3A3O00478 584 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 TERTO14746 1132 aaKnown RBP16.19■□□□□ 0.18
USB1-211ENST00000565662 OR1I1O60431 355 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 IGHEP01854 428 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 PLA2G2AP14555 144 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 MGAT1P26572 445 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 PTPN4P29074 926 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 PKLRP30613 574 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 CCR7P32248 378 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 COILP38432 576 aaPredicted RBP16.19■□□□□ 0.18
USB1-211ENST00000565662 KCNJ1P48048 391 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 PRKG2Q13237 762 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 KCNAB1Q14722 419 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 KYNUQ16719 465 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 TLDC1Q6P9B6 456 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 C9orf43Q8TAL5 461 aaPredicted RBP16.19■□□□□ 0.18
USB1-211ENST00000565662 DLG3Q92796 817 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 CLIP3Q96DZ5 547 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 OSBPL9Q96SU4 736 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 NAT9Q9BTE0 207 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 TWSG1Q9GZX9 223 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 P2RY12Q9H244 342 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 ACTR5Q9H9F9 607 aaPredicted RBP16.19■□□□□ 0.18
USB1-211ENST00000565662 FAM114A2Q9NRY5 505 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 SYBUQ9NX95 663 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 ANAPC2Q9UJX6 822 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 SLC39A10Q9ULF5 831 aa16.19■□□□□ 0.18
USB1-211ENST00000565662 BHMG1C9JSJ3 638 aaPredicted RBP16.18■□□□□ 0.18
USB1-211ENST00000565662 E5RI56 91 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 KLHL41O60662 606 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 KATNA1O75449 491 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 VAPBO95292 243 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 FAM87AP0C7U9 286 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 PRKAR1AP10644 381 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 ST6GAL1P15907 406 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 UGT2B7P16662 529 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 HSD17B2P37059 387 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 THOC5Q13769 683 aaKnown RBP16.18■□□□□ 0.18
USB1-211ENST00000565662 BRD3Q15059 726 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 GPR19Q15760 415 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 UGT8Q16880 541 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 YOD1Q5VVQ6 348 aaPredicted RBP16.18■□□□□ 0.18
USB1-211ENST00000565662 LRRC8EQ6NSJ5 796 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 C16orf46Q6P387 395 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 UNC5AQ6ZN44 842 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms