RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 CPNE7Q9UBL6 633 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 IQANK1A0A1B0GTG1 560 aa25.27■■□□□ 1.64
NME3-208ENST00000565379 EIF4E1BA6NMX2 242 aaKnown RBP25.27■■□□□ 1.64
NME3-208ENST00000565379 SAT1P21673 171 aa25.27■■□□□ 1.64
NME3-208ENST00000565379 EIF2S3P41091 472 aaKnown RBP25.27■■□□□ 1.64
NME3-208ENST00000565379 IL2P60568 153 aa25.27■■□□□ 1.64
NME3-208ENST00000565379 RAB10P61026 200 aa25.27■■□□□ 1.64
NME3-208ENST00000565379 ZKSCAN8Q15776 578 aaPredicted RBP25.27■■□□□ 1.64
NME3-208ENST00000565379 ISXQ2M1V0 245 aa25.27■■□□□ 1.64
NME3-208ENST00000565379 ACSBG2Q5FVE4 666 aa25.27■■□□□ 1.64
NME3-208ENST00000565379 PAQR3Q6TCH7 311 aa25.27■■□□□ 1.64
NME3-208ENST00000565379 CCDC74AQ96AQ1 378 aa25.27■■□□□ 1.64
NME3-208ENST00000565379 SLC30A3Q99726 388 aa25.27■■□□□ 1.64
NME3-208ENST00000565379 CCDC3Q9BQI4 270 aa25.27■■□□□ 1.64
NME3-208ENST00000565379 GPAMQ9HCL2 828 aa25.27■■□□□ 1.64
NME3-208ENST00000565379 IMP3Q9NV31 184 aaKnown RBP25.27■■□□□ 1.64
NME3-208ENST00000565379 ZNF624Q9P2J8 865 aaPredicted RBP25.27■■□□□ 1.64
NME3-208ENST00000565379 ARHGEF17Q96PE2 2063 aaPredicted RBP25.26■■□□□ 1.63
NME3-208ENST00000565379 KDM1AO60341 852 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 SNRPAP09012 282 aaKnown RBP25.26■■□□□ 1.63
NME3-208ENST00000565379 SLC26A3P40879 764 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 SLC19A1P41440 591 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 SERPINB8P50452 374 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 PDX1P52945 283 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 GABREP78334 506 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 HHEXQ03014 270 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 IFFO1Q0D2I5 559 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 KRT33BQ14525 404 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 CHCHD2P9Q5T1J5 151 aaPredicted RBP25.26■■□□□ 1.63
NME3-208ENST00000565379 MROH9Q5TGP6 573 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 LRRC69Q6ZNQ3 347 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 PIM3Q86V86 326 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 VRK3Q8IV63 474 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 TBC1D21Q8IYX1 336 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 MAGEC3Q8TD91 643 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 SKA2Q8WVK7 121 aaPredicted RBP25.26■■□□□ 1.63
NME3-208ENST00000565379 ANKRD7Q92527 254 aa25.26■■□□□ 1.63
NME3-208ENST00000565379 PDLIM5Q96HC4 596 aaKnown RBP25.26■■□□□ 1.63
NME3-208ENST00000565379 OR52A4PA6NMU1 304 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 RHPN2P1A8MT19 583 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 SHBGP04278 402 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 ZNF37AP17032 561 aaPredicted RBP25.25■■□□□ 1.63
NME3-208ENST00000565379 GCAP28676 217 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 CCNFP41002 786 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 GPR3P46089 330 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 MAZP56270 477 aaKnown RBP25.25■■□□□ 1.63
NME3-208ENST00000565379 BEND6Q5SZJ8 279 aaPredicted RBP25.25■■□□□ 1.63
NME3-208ENST00000565379 TTC23LQ6PF05 361 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 CPNE9Q8IYJ1 553 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 MYO1HQ8N1T3 1032 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 RIBC1Q8N443 379 aaPredicted RBP25.25■■□□□ 1.63
NME3-208ENST00000565379 ACVR1CQ8NER5 493 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 SPDYE1Q8NFV5 336 aaPredicted RBP25.25■■□□□ 1.63
NME3-208ENST00000565379 PATE1Q8WXA2 126 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 TRIT1Q9H3H1 467 aaKnown RBP25.25■■□□□ 1.63
NME3-208ENST00000565379 SLC40A1Q9NP59 571 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 LRIT1Q9P2V4 623 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 POLG2Q9UHN1 485 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 ASF1AQ9Y294 204 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 ENTPD2Q9Y5L3 495 aa25.25■■□□□ 1.63
NME3-208ENST00000565379 TRBV23OR9-2A0A075B6M9 112 aa25.24■■□□□ 1.63
NME3-208ENST00000565379 RRP8O43159 456 aaKnown RBP25.24■■□□□ 1.63
NME3-208ENST00000565379 CDH16O75309 829 aa25.24■■□□□ 1.63
NME3-208ENST00000565379 MATN4O95460 622 aa25.24■■□□□ 1.63
NME3-208ENST00000565379 NR1D2Q14995 579 aa25.24■■□□□ 1.63
NME3-208ENST00000565379 TBC1D25Q3MII6 688 aa25.24■■□□□ 1.63
NME3-208ENST00000565379 RAPH1Q70E73 1250 aa25.24■■□□□ 1.63
NME3-208ENST00000565379 ZNF438Q7Z4V0 828 aa25.24■■□□□ 1.63
NME3-208ENST00000565379 CROCCP2Q86T23 111 aa25.24■■□□□ 1.63
NME3-208ENST00000565379 CEP97Q8IW35 865 aa25.24■■□□□ 1.63
NME3-208ENST00000565379 OR5K2Q8NHB8 316 aa25.24■■□□□ 1.63
NME3-208ENST00000565379 ISL2Q96A47 359 aa25.24■■□□□ 1.63
NME3-208ENST00000565379 TMEM109Q9BVC6 243 aa25.24■■□□□ 1.63
NME3-208ENST00000565379 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.24■■□□□ 1.63
NME3-208ENST00000565379 SMG1Q96Q15 3661 aaKnown RBP25.24■■□□□ 1.63
NME3-208ENST00000565379 HMX2A2RU54 273 aa25.23■■□□□ 1.63
NME3-208ENST00000565379 ABRQ12979 859 aa25.23■■□□□ 1.63
NME3-208ENST00000565379 BMPR2Q13873 1038 aa25.23■■□□□ 1.63
NME3-208ENST00000565379 TAF1BQ53T94 588 aaPredicted RBP25.23■■□□□ 1.63
NME3-208ENST00000565379 C3orf38Q5JPI3 329 aa25.23■■□□□ 1.63
NME3-208ENST00000565379 TIFABQ6ZNK6 161 aa25.23■■□□□ 1.63
NME3-208ENST00000565379 RBM44Q6ZP01 1051 aaKnown RBP25.23■■□□□ 1.63
NME3-208ENST00000565379 B3GNT8Q7Z7M8 397 aa25.23■■□□□ 1.63
NME3-208ENST00000565379 SNIP1Q8TAD8 396 aaKnown RBP25.23■■□□□ 1.63
NME3-208ENST00000565379 EEF1AKMT1Q8WVE0 214 aa25.23■■□□□ 1.63
NME3-208ENST00000565379 LINGO1Q96FE5 620 aa25.23■■□□□ 1.63
NME3-208ENST00000565379 FERD3LQ96RJ6 166 aa25.23■■□□□ 1.63
NME3-208ENST00000565379 CAB39LQ9H9S4 337 aa25.23■■□□□ 1.63
NME3-208ENST00000565379 TLK1Q9UKI8 766 aa25.23■■□□□ 1.63
NME3-208ENST00000565379 SATB2Q9UPW6 733 aa25.23■■□□□ 1.63
NME3-208ENST00000565379 RNF215Q9Y6U7 377 aa25.23■■□□□ 1.63
NME3-208ENST00000565379 MGAQ8IWI9 3026 aa25.23■■□□□ 1.63
NME3-208ENST00000565379 A0A087X1B8 175 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 LILRA5A6NI73 299 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 RASGRF2O14827 1237 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 SLC16A5O15375 505 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 WISP3O95389 354 aaPredicted RBP25.22■■□□□ 1.63
NME3-208ENST00000565379 C8GP07360 202 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 TYK2P29597 1187 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 EPHA4P54764 986 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms