RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 SOX13Q9UN79 622 aa24.48■■□□□ 1.51
AC009041.3-201ENST00000564390 NDUFS3O75489 264 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 APOA4P06727 396 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 CHRM5P08912 532 aaPredicted RBP24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 FURINP09958 794 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 COILP38432 576 aaPredicted RBP24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 MAGEA6P43360 314 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 CCR10P46092 362 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 EIF3BP55884 814 aaKnown RBP24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 GPS2Q13227 327 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 ERV3-1Q14264 604 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 LMNTD1Q8N9Z9 388 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 SLC38A9Q8NBW4 561 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 OR8K5Q8NH50 307 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 OR1L3Q8NH93 324 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 ASZ1Q8WWH4 475 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 CPT1BQ92523 772 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 OSBPL9Q96SU4 736 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 GEMIN8Q9NWZ8 242 aaKnown RBP24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 GNPTGQ9UJJ9 305 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 COL6A6A6NMZ7 2263 aa24.47■■□□□ 1.51
AC009041.3-201ENST00000564390 GOLGA8MH3BSY2 632 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 GPC4O75487 556 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 AOAHP28039 575 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 RPS18P62269 152 aaKnown RBP24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 KCNAB2Q13303 367 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 TMED2Q15363 201 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 CYP1B1Q16678 543 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 DNAJC21Q5F1R6 531 aaKnown RBP24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 CASC4Q6P4E1 433 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 CCDC137Q6PK04 289 aaKnown RBP24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 TMEM135Q86UB9 458 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 CAND1Q86VP6 1230 aaKnown RBP24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 HOOK3Q86VS8 718 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 OR2A14Q96R47 310 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 ACTL8Q9H568 366 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 LATS2Q9NRM7 1088 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 STARD5Q9NSY2 213 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 IL1RAPL1Q9NZN1 696 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 KCND3Q9UK17 655 aa24.46■■□□□ 1.51
AC009041.3-201ENST00000564390 PYCARD-AS1I3L0S3 204 aa24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 ZNF185O15231 689 aa24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 ZSCAN12O43309 604 aa24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 PEBP1P30086 187 aaKnown RBP24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 DEFB110Q30KQ9 67 aa24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 ZNF789Q5FWF6 425 aa24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 CTSL3PQ5NE16 218 aa24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 CDHR3Q6ZTQ4 885 aa24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 PRICKLE2Q7Z3G6 844 aa24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 C19orf47Q8N9M1 422 aaKnown RBP24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 FLVCR1-AS1Q8TAF5 88 aa24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 MR1Q95460 341 aa24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 NAP1L3Q99457 506 aaPredicted RBP24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 TSR3Q9UJK0 312 aaKnown RBP24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 RUVBL2Q9Y230 463 aaKnown RBP24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 NEU2Q9Y3R4 380 aa24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 PCDHB3Q9Y5E6 796 aa24.45■■□□□ 1.5
AC009041.3-201ENST00000564390 CDC14CA4D256 554 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 SLC28A2O43868 658 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 CYP2A7P20853 494 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 PKLRP30613 574 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 SARNPP82979 210 aaKnown RBP24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 ZIC1Q15915 447 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 KIAA0930Q6ICG6 404 aaPredicted RBP24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 MRNIPQ6NTE8 343 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 FAM20CQ8IXL6 584 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 C2orf73Q8N5S3 287 aaPredicted RBP24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 FAM136AQ96C01 138 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 IL17FQ96PD4 163 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 FAM117AQ9C073 453 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 TWSG1Q9GZX9 223 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 ADNPQ9H2P0 1102 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 FAM60AQ9NP50 221 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 OR6C2Q9NZP2 312 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 PCDHGA6Q9Y5G7 932 aa24.44■■□□□ 1.5
AC009041.3-201ENST00000564390 ISM1B1AKI9 464 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 C21orf140B9A014 251 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 MAP3K7O43318 606 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 KIF5CO60282 957 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 PHF2O75151 1096 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 CREG1O75629 220 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 SLCO2B1O94956 709 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 F7P08709 466 aaPredicted RBP24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 SFTPCP11686 197 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 RPS3P23396 243 aaKnown RBP eCLIP24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 FMO4P31512 558 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 CRTC2Q53ET0 693 aaPredicted RBP24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 LCN10Q6JVE6 187 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 TAX1BP1Q86VP1 789 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 LRRC6Q86X45 466 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 DCUN1D3Q8IWE4 304 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 LPGAT1Q92604 370 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 ZNF669Q96BR6 464 aaPredicted RBP24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 CLIP3Q96DZ5 547 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 PANX3Q96QZ0 392 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 SLC25A18Q9H1K4 315 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 CHST8Q9H2A9 424 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 SAMD15Q9P1V8 674 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 SNX12Q9UMY4 172 aa24.43■■□□□ 1.5
AC009041.3-201ENST00000564390 HEMK1Q9Y5R4 338 aaPredicted RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms