RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 OTOAQ7RTW8 1153 aa27.42■■□□□ 1.98
NME3-203ENST00000563367 CARFQ8N187 725 aa27.42■■□□□ 1.98
NME3-203ENST00000563367 EBNA1BP2Q99848 306 aaKnown RBP27.42■■□□□ 1.98
NME3-203ENST00000563367 FBXO6Q9NRD1 293 aaPredicted RBP27.42■■□□□ 1.98
NME3-203ENST00000563367 C1GALT1Q9NS00 363 aa27.42■■□□□ 1.98
NME3-203ENST00000563367 KPNA5O15131 536 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 TP73O15350 636 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 PKMP14618 531 aaKnown RBP27.41■■□□□ 1.98
NME3-203ENST00000563367 SLC1A2P43004 574 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 MRPS25P82663 173 aaKnown RBP27.41■■□□□ 1.98
NME3-203ENST00000563367 TUBB3Q13509 450 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 BBS9Q3SYG4 887 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 UNC5DQ6UXZ4 953 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 RASGRP3Q8IV61 690 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 NLGN4XQ8N0W4 816 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 IL22RA1Q8N6P7 574 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 SERBP1Q8NC51 408 aaKnown RBP eCLIP27.41■■□□□ 1.98
NME3-203ENST00000563367 NLGN4YQ8NFZ3 816 aaPredicted RBP27.41■■□□□ 1.98
NME3-203ENST00000563367 PITPNM3Q9BZ71 974 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 ULBP3Q9BZM4 244 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 TRIM31Q9BZY9 425 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 SPHK1Q9NYA1 384 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 CIDEBQ9UHD4 219 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 BTRCQ9Y297 605 aa27.41■■□□□ 1.98
NME3-203ENST00000563367 ATMQ13315 3056 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 C2orf74A8MZ97 194 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 H3BMM5 538 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 SPAG6O75602 509 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 TIAF1O95411 115 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 ST6GAL1P15907 406 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 ITGA8P53708 1063 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 GRB7Q14451 532 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 CRYMQ14894 314 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 HSP90AA5PQ58FG0 334 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 PLEKHS1Q5SXH7 462 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 PPP1R3BQ86XI6 285 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 BBC3Q96PG8 261 aaPredicted RBP27.4■■□□□ 1.98
NME3-203ENST00000563367 TWSG1Q9GZX9 223 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 FGF21Q9NSA1 209 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 RUVBL2Q9Y230 463 aaKnown RBP27.4■■□□□ 1.98
NME3-203ENST00000563367 VPS9D1Q9Y2B5 631 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 NFS1Q9Y697 457 aa27.4■■□□□ 1.98
NME3-203ENST00000563367 PIPSLA2A3N6 862 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 SEC31AO94979 1220 aaKnown RBP27.39■■□□□ 1.98
NME3-203ENST00000563367 CHRM5P08912 532 aaPredicted RBP27.39■■□□□ 1.98
NME3-203ENST00000563367 LIFP15018 202 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 PVRP15151 417 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 CHRM3P20309 590 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 ACY1Q03154 408 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 GBX1Q14549 363 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 GPR19Q15760 415 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 KYNUQ16719 465 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 LARP7Q4G0J3 582 aaKnown RBP eCLIP27.39■■□□□ 1.98
NME3-203ENST00000563367 HP1BP3Q5SSJ5 553 aaPredicted RBP27.39■■□□□ 1.98
NME3-203ENST00000563367 ZNF549Q6P9A3 640 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 SPNS2Q8IVW8 549 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 LMNTD1Q8N9Z9 388 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 SPATA4Q8NEY3 305 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 FLVCR1-AS1Q8TAF5 88 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 SNF8Q96H20 258 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 OR2A14Q96R47 310 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 WDR83Q9BRX9 315 aaKnown RBP27.39■■□□□ 1.98
NME3-203ENST00000563367 MENTQ9BUN1 341 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 KLHL25Q9H0H3 589 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 PLAC1Q9HBJ0 212 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 PDE7BQ9NP56 450 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 IARS2Q9NSE4 1012 aaKnown RBP27.39■■□□□ 1.98
NME3-203ENST00000563367 SOHLH2Q9NX45 425 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 OR6C2Q9NZP2 312 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 RARRES3Q9UL19 164 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 CACNA1GO43497 2377 aa27.39■■□□□ 1.98
NME3-203ENST00000563367 KIAA0754O94854 1291 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 UGT2B7P16662 529 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 MAP4P27816 1152 aaKnown RBP27.38■■□□□ 1.97
NME3-203ENST00000563367 PKLRP30613 574 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 MPP1Q00013 466 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 SOWAHCQ53LP3 525 aaPredicted RBP27.38■■□□□ 1.97
NME3-203ENST00000563367 KIAA1614Q5VZ46 1190 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 PWWP2BQ6NUJ5 590 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 SPESP1Q6UW49 350 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 TRIM73Q86UV7 250 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 KCNMB4Q86W47 210 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 DCUN1D3Q8IWE4 304 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 LMNTD2Q8IXW0 634 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 GSDMBQ8TAX9 411 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 CALML6Q8TD86 181 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 TRAPPC9Q96Q05 1148 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 LATS2Q9NRM7 1088 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 TSR3Q9UJK0 312 aaKnown RBP27.38■■□□□ 1.97
NME3-203ENST00000563367 FBXO5Q9UKT4 447 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 MED16Q9Y2X0 877 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 PCDHGA4Q9Y5G9 962 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 PCM1Q15154 2024 aa27.38■■□□□ 1.97
NME3-203ENST00000563367 LOC101059948A0A1B0GTJ6 334 aa27.37■■□□□ 1.97
NME3-203ENST00000563367 EFCAB8A8MWE9 144 aa27.37■■□□□ 1.97
NME3-203ENST00000563367 ERVK-10P10266 1014 aa27.37■■□□□ 1.97
NME3-203ENST00000563367 PEBP1P30086 187 aaKnown RBP27.37■■□□□ 1.97
NME3-203ENST00000563367 ELK3P41970 407 aa27.37■■□□□ 1.97
NME3-203ENST00000563367 RPL21P46778 160 aaKnown RBP27.37■■□□□ 1.97
NME3-203ENST00000563367 TUBB4BP68371 445 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms