RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 PAX1P15863 534 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 HOXB6P17509 224 aaKnown RBP5.18□□□□□ -1.58
LINC00557-201ENST00000563184 PTAFRP25105 342 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 EPHA2P29317 976 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 TECRLQ5HYJ1 363 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 CCNYL2Q5T2Q4 361 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 C19orf48Q6RUI8 117 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 SUSD1Q6UWL2 747 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 ZBTB49Q6ZSB9 765 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 CAMKVQ8NCB2 501 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 NPEPL1Q8NDH3 523 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 SSMEM1Q8WWF3 244 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 SYN2Q92777 582 aaPredicted RBP5.18□□□□□ -1.58
LINC00557-201ENST00000563184 DHX58Q96C10 678 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 MYADMQ96S97 322 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 TRAF4Q9BUZ4 470 aaPredicted RBP5.18□□□□□ -1.58
LINC00557-201ENST00000563184 MMP28Q9H239 520 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 SERINC1Q9NRX5 453 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.18□□□□□ -1.58
LINC00557-201ENST00000563184 LIPGQ9Y5X9 500 aa5.18□□□□□ -1.58
LINC00557-201ENST00000563184 NEMP2A6NFY4 417 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 PRSS44E7EML9 344 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 FGF17O60258 216 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 HSPA4LO95757 839 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 IGLV2-11P01706 119 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 IGHV2-70P01814 119 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 NR3C1P04150 777 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 QDPRP09417 244 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 SMIM18P0DKX4 95 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 CD22P20273 847 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 AZGP1P25311 298 aaKnown RBP5.17□□□□□ -1.58
LINC00557-201ENST00000563184 SLC6A6P31641 620 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 MAPK12P53778 367 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 B3GALT5-AS1P59052 145 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 POLR2LP62875 67 aaKnown RBP5.17□□□□□ -1.58
LINC00557-201ENST00000563184 TNIP1Q15025 636 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 PHLDA2Q53GA4 152 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 SYT14P1Q58G82 188 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 WDR38Q5JTN6 314 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 SPDYCQ5MJ68 293 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 KRT39Q6A163 491 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 MFSD12Q6NUT3 480 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 IL27RAQ6UWB1 636 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 MARK2Q7KZI7 788 aaKnown RBP5.17□□□□□ -1.58
LINC00557-201ENST00000563184 CFAP206Q8IYR0 622 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 ZNF843Q8N446 348 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 TTC30BQ8N4P2 665 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 PPFIBP2Q8ND30 876 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 KIF18AQ8NI77 898 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 FCAMRQ8WWV6 532 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 IRGQQ8WZA9 623 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 HSD17B8Q92506 261 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 FEVQ99581 238 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 CPNE1Q99829 537 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 PSD2Q9BQI7 771 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 RTP3Q9BQQ7 232 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 A4GALTQ9NPC4 353 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 FLT1P17948 1338 aa5.17□□□□□ -1.58
LINC00557-201ENST00000563184 SLC22A2O15244 555 aa5.16□□□□□ -1.58
LINC00557-201ENST00000563184 LMX1BO60663 402 aa5.16□□□□□ -1.58
LINC00557-201ENST00000563184 RNASEH1O60930 286 aaKnown RBP5.16□□□□□ -1.58
LINC00557-201ENST00000563184 ERCC2P18074 760 aa5.16□□□□□ -1.58
LINC00557-201ENST00000563184 PPIGQ13427 754 aaKnown RBP eCLIP5.16□□□□□ -1.58
LINC00557-201ENST00000563184 PSMD6Q15008 389 aa5.16□□□□□ -1.58
LINC00557-201ENST00000563184 OR1J1Q8NGS3 322 aa5.16□□□□□ -1.58
LINC00557-201ENST00000563184 ROBO4Q8WZ75 1007 aa5.16□□□□□ -1.58
LINC00557-201ENST00000563184 ZNF354BQ96LW1 612 aa5.16□□□□□ -1.58
LINC00557-201ENST00000563184 ZNF558Q96NG5 402 aa5.16□□□□□ -1.58
LINC00557-201ENST00000563184 NODALQ96S42 347 aa5.16□□□□□ -1.58
LINC00557-201ENST00000563184 SDF2L1Q9HCN8 221 aa5.16□□□□□ -1.58
LINC00557-201ENST00000563184 SLC7A7Q9UM01 511 aa5.16□□□□□ -1.58
LINC00557-201ENST00000563184 FAM172BPA6NC97 362 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 ACSL3O95573 720 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 PENKP01210 267 aaPredicted RBP5.15□□□□□ -1.59
LINC00557-201ENST00000563184 IGHV4-38-2P0DP08 117 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 HAPLN1P10915 354 aaPredicted RBP5.15□□□□□ -1.59
LINC00557-201ENST00000563184 GLULP15104 373 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 GNAZP19086 355 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 NPY4RP50391 375 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 CDH11P55287 796 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 LINC01547P58512 204 aaPredicted RBP5.15□□□□□ -1.59
LINC00557-201ENST00000563184 LGALS3BPQ08380 585 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 ZNF273Q14593 569 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 CA9Q16790 459 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 ZC2HC1CQ53FD0 456 aaPredicted RBP5.15□□□□□ -1.59
LINC00557-201ENST00000563184 SPECC1Q5M775 1068 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 DCAF10Q5QP82 559 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 ELFN2Q5R3F8 820 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 STPG1Q5TH74 334 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 DET1Q7L5Y6 550 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 NUP54Q7Z3B4 507 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 ARHGAP22Q7Z5H3 698 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 KRT77Q7Z794 578 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 NR2C2APQ86WQ0 139 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 VSIG1Q86XK7 387 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 TMEM139Q8IV31 216 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 SPSB1Q96BD6 273 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 MOB3AQ96BX8 217 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 STAMBPL1Q96FJ0 436 aa5.15□□□□□ -1.59
LINC00557-201ENST00000563184 OTUB1Q96FW1 271 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms