RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 S1PR4O95977 384 aa7.41□□□□□ -1.22
TCF4-216ENST00000562680 ITGAXP20702 1163 aa7.41□□□□□ -1.22
TCF4-216ENST00000562680 ITPKAP23677 461 aa7.41□□□□□ -1.22
TCF4-216ENST00000562680 RRM2P31350 389 aa7.41□□□□□ -1.22
TCF4-216ENST00000562680 EPS8Q12929 822 aa7.41□□□□□ -1.22
TCF4-216ENST00000562680 TRIM40Q6P9F5 258 aa7.41□□□□□ -1.22
TCF4-216ENST00000562680 TAF8Q7Z7C8 310 aa7.41□□□□□ -1.22
TCF4-216ENST00000562680 APCDD1Q8J025 514 aa7.41□□□□□ -1.22
TCF4-216ENST00000562680 OR2T3Q8NH03 318 aa7.41□□□□□ -1.22
TCF4-216ENST00000562680 MOV10Q9HCE1 1003 aaKnown RBP7.41□□□□□ -1.22
TCF4-216ENST00000562680 TRIM39Q9HCM9 518 aa7.41□□□□□ -1.22
TCF4-216ENST00000562680 C1orf109Q9NX04 203 aa7.41□□□□□ -1.22
TCF4-216ENST00000562680 TRPC4Q9UBN4 977 aa7.41□□□□□ -1.22
TCF4-216ENST00000562680 EIF2B4Q9UI10 523 aaKnown RBP7.41□□□□□ -1.22
TCF4-216ENST00000562680 HS3ST2Q9Y278 367 aa7.41□□□□□ -1.22
TCF4-216ENST00000562680 WBP11Q9Y2W2 641 aaKnown RBP7.41□□□□□ -1.22
TCF4-216ENST00000562680 GSAPA4D1B5 854 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 FAM25AB3EWG3 89 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 FAM25CB3EWG5 89 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 FAM25GB3EWG6 89 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 ECI2O75521 394 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 POP7O75817 140 aaKnown RBP7.4□□□□□ -1.22
TCF4-216ENST00000562680 PDE9AO76083 593 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 LDLRP01130 860 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 APOA1P02647 267 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 VIPR2P41587 438 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 KIR3DL1P43629 444 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 STK19P49842 368 aaPredicted RBP7.4□□□□□ -1.22
TCF4-216ENST00000562680 RIPK1Q13546 671 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 HSF5Q4G112 596 aaPredicted RBP7.4□□□□□ -1.22
TCF4-216ENST00000562680 AAGABQ6PD74 315 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 ZNF621Q6ZSS3 439 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 Q6ZVL8 140 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 TMEM173Q86WV6 379 aaPredicted RBP7.4□□□□□ -1.22
TCF4-216ENST00000562680 CPSF7Q8N684 471 aaKnown RBP7.4□□□□□ -1.22
TCF4-216ENST00000562680 PPCDCQ96CD2 204 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 DNMT3BQ9UBC3 853 aaKnown RBP7.4□□□□□ -1.22
TCF4-216ENST00000562680 SLCO3A1Q9UIG8 710 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 MYO1GB0I1T2 1018 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 LINC00032P0C843 101 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 SSR2P43308 183 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 GALK1P51570 392 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 STXBP1P61764 594 aaKnown RBP7.4□□□□□ -1.22
TCF4-216ENST00000562680 CSTF3Q12996 717 aaKnown RBP7.4□□□□□ -1.22
TCF4-216ENST00000562680 SF1Q15637 639 aaKnown RBP7.4□□□□□ -1.22
TCF4-216ENST00000562680 CLPPQ16740 277 aaPredicted RBP7.4□□□□□ -1.22
TCF4-216ENST00000562680 TBCELQ5QJ74 424 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 RBM20Q5T481 1227 aaKnown RBP7.4□□□□□ -1.22
TCF4-216ENST00000562680 METTL2BQ6P1Q9 378 aaKnown RBP7.4□□□□□ -1.22
TCF4-216ENST00000562680 TMIEQ8NEW7 156 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 SLC22A8Q8TCC7 542 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 HMGB4Q8WW32 186 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 ROPN1LQ96C74 230 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 ZFYVE19Q96K21 471 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 RNF38Q9H0F5 515 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 SOHLH2Q9NX45 425 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 IL17CQ9P0M4 197 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 KCTD3Q9Y597 815 aa7.4□□□□□ -1.22
TCF4-216ENST00000562680 OR5K4A6NMS3 321 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 DLX3O60479 287 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 CREB1P16220 341 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 ITGB7P26010 798 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 ACRV1P26436 265 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 EIF2DP41214 584 aaKnown RBP7.4□□□□□ -1.23
TCF4-216ENST00000562680 CENPAP49450 140 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 INAVAQ3KP66 663 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 MANEALQ5VSG8 457 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 PRR23BQ6ZRT6 265 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 PLPP6Q8IY26 295 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 AIFM2Q9BRQ8 373 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 TBC1D10AQ9BXI6 508 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 SERHL2Q9H4I8 314 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 ANGPT4Q9Y264 503 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 COL11A1P12107 1806 aaPredicted RBP7.4□□□□□ -1.23
TCF4-216ENST00000562680 ZCWPW2A0A1B0GU75 182 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 M0R3G1 203 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 MMP20O60882 483 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 TNFP01375 233 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 ANXA6P08133 673 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 ATXN8OSP0DMR3 200 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 HRH2P25021 359 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 FOXN2P32314 431 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 SPINT3P49223 89 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 CCT8P50990 548 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 SLC34A1Q06495 639 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 DUSP6Q16828 381 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 HLA-DQA1Q5Y7H0 255 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 C12orf66Q96MD2 445 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 FCRL3Q96P31 734 aaPredicted RBP7.4□□□□□ -1.23
TCF4-216ENST00000562680 NMUR2Q9GZQ4 415 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 SEMA3GQ9NS98 782 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 ANAPC2Q9UJX6 822 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 PIAS3Q9Y6X2 628 aa7.4□□□□□ -1.23
TCF4-216ENST00000562680 HIDE1A8MVS5 230 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 SIN3BO75182 1162 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 KLF8O95600 359 aaPredicted RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 IGLV3-27P01718 113 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 SLC35G6P0C7Q6 338 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 TSPAN8P19075 237 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 FDXRP22570 491 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 410.6 ms