RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 FETUBQ9UGM5 382 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 ANGPTL2Q9UKU9 493 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 PCDHGA8Q9Y5G5 932 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 NFS1Q9Y697 457 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 CELSR3Q9NYQ7 3312 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 ARHGEF33A8MVX0 844 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 RIPK2O43353 540 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 PRICKLE3O43900 615 aaPredicted RBP13.03□□□□□ -0.32
CDH1-204ENST00000562118 SHMT2P34897 504 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 MLLT3P42568 568 aaPredicted RBP13.03□□□□□ -0.32
CDH1-204ENST00000562118 TAS2R39P59534 338 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 EFTUD2Q15029 972 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDH1-204ENST00000562118 MAP9Q49MG5 647 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 KLHL35Q6PF15 583 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 PAQR3Q6TCH7 311 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 PLXDC1Q8IUK5 500 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 SPNS2Q8IVW8 549 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 CPNE9Q8IYJ1 553 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 BMPERQ8N8U9 685 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 LINC01555Q8NAE3 123 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 PHC3Q8NDX5 983 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 DENND1AQ8TEH3 1009 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 SLC44A1Q8WWI5 657 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 FAM136AQ96C01 138 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 FERD3LQ96RJ6 166 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 HGH1Q9BTY7 390 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 PITPNM3Q9BZ71 974 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 B3GNT4Q9C0J1 378 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 RDH14Q9HBH5 336 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 SIDT1Q9NXL6 827 aaKnown RBP13.03□□□□□ -0.32
CDH1-204ENST00000562118 TRMT6Q9UJA5 497 aaKnown RBP13.03□□□□□ -0.32
CDH1-204ENST00000562118 ZNF180Q9UJW8 692 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 POMT2Q9UKY4 750 aa13.03□□□□□ -0.32
CDH1-204ENST00000562118 CCDC187A0A096LP49 1063 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 FAM149AA5PLN7 773 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 BTN3A3O00478 584 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 RASGRF2O14827 1237 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 SLC16A5O15375 505 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 ZZEF1O43149 2961 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 JUPP14923 745 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 KCNA4P22459 653 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 PEBP1P30086 187 aaKnown RBP13.02□□□□□ -0.33
CDH1-204ENST00000562118 MAGEA12P43365 314 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 RAB28P51157 221 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 GFERP55789 205 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 PPP1CAP62136 330 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 VSNL1P62760 191 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 SP140Q13342 867 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 BIRC2Q13490 618 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 C16orf72Q14CZ0 275 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 CYP2A13Q16696 494 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 AMZ1Q400G9 498 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 CCDC157Q569K6 752 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 USP53Q70EK8 1073 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 AMIGO1Q86WK6 493 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 OOSP2Q86WS3 158 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 MARCH9Q86YJ5 346 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 CEP97Q8IW35 865 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 GPATCH11Q8N954 259 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 EEF1AKMT1Q8WVE0 214 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 KLHL6Q8WZ60 621 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 DLG3Q92796 817 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 RAD51AP1Q96B01 352 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 ATXN7L3BQ96GX2 97 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 UBXN10Q96LJ8 280 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 CCDC74BQ96LY2 380 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 NRTNQ99748 197 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 CHRNA10Q9GZZ6 450 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 ZNF768Q9H5H4 540 aaKnown RBP13.02□□□□□ -0.33
CDH1-204ENST00000562118 SPATA7Q9P0W8 599 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 RAB21Q9UL25 225 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 RUVBL2Q9Y230 463 aaKnown RBP13.02□□□□□ -0.33
CDH1-204ENST00000562118 MTO1Q9Y2Z2 717 aaKnown RBP13.02□□□□□ -0.33
CDH1-204ENST00000562118 KLK4Q9Y5K2 254 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 CFAP47Q6ZTR5 3102 aa13.02□□□□□ -0.33
CDH1-204ENST00000562118 IGF2RP11717 2491 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 TLCD2A6NGC4 264 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 BTN3A1O00481 513 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 CAPN5O15484 640 aaPredicted RBP13.01□□□□□ -0.33
CDH1-204ENST00000562118 KDM1AO60341 852 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 FAM155BO75949 473 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 ACSL3O95573 720 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 C8GP07360 202 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 ITGA2BP08514 1039 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 MSL3P1P0C860 447 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 TYRP1P17643 537 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 SPINK2P20155 84 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 MCM3P25205 808 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 GCAP28676 217 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 SPRP35270 261 aaPredicted RBP13.01□□□□□ -0.33
CDH1-204ENST00000562118 LSSP48449 732 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 KPNA2P52292 529 aaKnown RBP13.01□□□□□ -0.33
CDH1-204ENST00000562118 PMS2P54278 862 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 ABRQ12979 859 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 ARHGAP19Q14CB8 494 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 PPP1R3AQ16821 1122 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 CCSMST1Q4G0I0 132 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 PIWIL4Q7Z3Z4 852 aaKnown RBP13.01□□□□□ -0.33
CDH1-204ENST00000562118 GSPT2Q8IYD1 628 aaKnown RBP13.01□□□□□ -0.33
CDH1-204ENST00000562118 LRRC56Q8IYG6 542 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms