RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 UBQLNLQ8IYU4 475 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ADGRF4Q8IZF3 695 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CADM3Q8N126 398 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TMEM132CQ8N3T6 1108 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 LCORLQ8N3X6 602 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 FAM109AQ8N4B1 249 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ARL14Q8N4G2 192 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 PARP16Q8N5Y8 322 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 EMC1Q8N766 993 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 NIPA2Q8N8Q9 360 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 GBP7Q8N8V2 638 aaPredicted RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 SPERTQ8NA61 448 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TXNDC5Q8NBS9 432 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 PPFIBP2Q8ND30 876 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 PAPD5Q8NDF8 572 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 STKLD1Q8NE28 680 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 OR8K3Q8NH51 312 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TBC1D16Q8TBP0 767 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 GPT2Q8TD30 523 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ATP8B4Q8TF62 1192 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 METTL21AQ8WXB1 218 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 STARD8Q92502 1023 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 IP6K1Q92551 441 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 IGSF8Q969P0 613 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 RASD2Q96D21 266 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 SNRNP40Q96DI7 357 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 THOC1Q96FV9 657 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 BOD1Q96IK1 185 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 METTL2AQ96IZ6 378 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 LOXL4Q96JB6 756 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 SLC41A2Q96JW4 573 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 MARK4Q96L34 752 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 PRMT6Q96LA8 375 aaPredicted RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 SENP8Q96LD8 212 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 FAM81BQ96LP2 452 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 LRRC3BQ96PB8 259 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 PCDHB18PQ96TA0 734 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ACOX2Q99424 681 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 FEVQ99581 238 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CPNE1Q99829 537 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ADAM2Q99965 735 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 FAM110AQ9BQ89 295 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TUBA1CQ9BQE3 449 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 SPATA25Q9BR10 227 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ZNF559Q9BR84 538 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ATG101Q9BSB4 218 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TRMT61BQ9BVS5 477 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 SSBP4Q9BWG4 385 aaPredicted RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 GPR87Q9BY21 358 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 GSDMCQ9BYG8 508 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CIPCQ9C0C6 399 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TKTL2Q9H0I9 626 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TRPV6Q9H1D0 765 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 S1PR5Q9H228 398 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 UBQLN3Q9H347 655 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CATSPERBQ9H7T0 1116 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 WDR76Q9H967 626 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ACTR8Q9H981 624 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ROPN1Q9HAT0 212 aaPredicted RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 MAGEF1Q9HAY2 307 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CDH20Q9HBT6 801 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 HINT3Q9NQE9 182 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 SERINC1Q9NRX5 453 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 GLRX2Q9NS18 164 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 MTMR10Q9NXD2 777 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 DONSONQ9NYP3 566 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CISD1Q9NZ45 108 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 CHMP5Q9NZZ3 219 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 VPS54Q9P1Q0 977 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 KLHL13Q9P2N7 655 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 NDRG3Q9UGV2 375 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 FZD4Q9ULV1 537 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 OAZ3Q9UMX2 235 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 GABRQQ9UN88 632 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CDC14AQ9UNH5 594 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ZNF510Q9Y2H8 683 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 SH3GLB1Q9Y371 365 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CHTOPQ9Y3Y2 248 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 IRAK3Q9Y616 596 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 A3GALT2U3KPV4 340 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 KANK1Q14678 1352 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.98□□□□□ -2.09
RTF1-207ENST00000561076 SPATA31A1Q5TZJ5 1347 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 MROH5Q6ZUA9 1318 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ZNF335Q9H4Z2 1342 aaPredicted RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 FAM240BA0A1B0GVZ2 78 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 A0A1W2PR77 199 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ANKUB1A6NFN9 424 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 DDTLA6NHG4 134 aaPredicted RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 TUBAL3A6NHL2 446 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CBY3A6NI87 242 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 C17orf100A8MU93 164 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 MEI4A8MW99 385 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 UBE2Q2LH0YL09 131 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 M0QZ24 198 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 LEFTY2O00292 366 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 SLC28A1O00337 649 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 PRYO14603 147 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 XPO1O14980 1071 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 LRRTM2O43300 516 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms