RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 TUBD1Q9UJT1 453 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 CPNE3O75131 537 aaKnown RBP15.46■□□□□ 0.07
LMX1B-204ENST00000561065 KATNA1O75449 491 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 SCRG1O75711 98 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 MC1RQ01726 317 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 PRKAA1Q13131 559 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 ERV3-1Q14264 604 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 LCN10Q6JVE6 187 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 MRNIPQ6NTE8 343 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 ZNF517Q6ZMY9 492 aaPredicted RBP15.46■□□□□ 0.07
LMX1B-204ENST00000561065 AMIGO1Q86WK6 493 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 PTRH1Q86Y79 214 aaKnown RBP15.46■□□□□ 0.07
LMX1B-204ENST00000561065 TMEM126BQ8IUX1 230 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 VRK3Q8IV63 474 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 MPP5Q8N3R9 675 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 OR1L3Q8NH93 324 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 FLVCR1-AS1Q8TAF5 88 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 GSDMBQ8TAX9 411 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 MS4A14Q96JA4 679 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 TWSG1Q9GZX9 223 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 ACTL8Q9H568 366 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 MRM3Q9HC36 420 aaKnown RBP15.46■□□□□ 0.07
LMX1B-204ENST00000561065 LATS2Q9NRM7 1088 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 ACTR10Q9NZ32 417 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 PADI1Q9ULC6 663 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 PLAGL1Q9UM63 463 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 CDYLQ9Y232 598 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 VPS9D1Q9Y2B5 631 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 HEMK1Q9Y5R4 338 aaPredicted RBP15.46■□□□□ 0.07
LMX1B-204ENST00000561065 KCNMB2Q9Y691 235 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 SAR1BQ9Y6B6 198 aa15.46■□□□□ 0.07
LMX1B-204ENST00000561065 TNRC6AQ8NDV7 1962 aaKnown RBP15.46■□□□□ 0.07
LMX1B-204ENST00000561065 MED13Q9UHV7 2174 aa15.46■□□□□ 0.06
LMX1B-204ENST00000561065 SDR42E2A6NKP2 422 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 IQCF5A8MTL0 148 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 MATN2O00339 956 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 NDC80O14777 642 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 KPNA5O15131 536 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 HCRTR1O43613 425 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 CREG1O75629 220 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 MT-ND3P03897 115 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 PEBP1P30086 187 aaKnown RBP15.45■□□□□ 0.06
LMX1B-204ENST00000561065 CSE1LP55060 971 aaKnown RBP15.45■□□□□ 0.06
LMX1B-204ENST00000561065 IL10RAQ13651 578 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 CASC4Q6P4E1 433 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 BPHLQ86WA6 291 aaPredicted RBP15.45■□□□□ 0.06
LMX1B-204ENST00000561065 MCUQ8NE86 351 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 APOBEC4Q8WW27 367 aaKnown RBP15.45■□□□□ 0.06
LMX1B-204ENST00000561065 TRAPPC9Q96Q05 1148 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 TCF12Q99081 682 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 NAPGQ99747 312 aaPredicted RBP15.45■□□□□ 0.06
LMX1B-204ENST00000561065 ZNF71Q9NQZ8 489 aaPredicted RBP15.45■□□□□ 0.06
LMX1B-204ENST00000561065 CHRAC1Q9NRG0 131 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 KCND1Q9NSA2 647 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 TREX1Q9NSU2 369 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 CATSPERZQ9NTU4 200 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 SPHK1Q9NYA1 384 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 KCND3Q9UK17 655 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 ASF1AQ9Y294 204 aa15.45■□□□□ 0.06
LMX1B-204ENST00000561065 TCRBV7S3A2A0A539 114 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 CDC14CA4D256 554 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 C21orf140B9A014 251 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 TMEM150CB9EJG8 249 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 K7EM74 188 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 CD3EAPO15446 510 aaKnown RBP15.44■□□□□ 0.06
LMX1B-204ENST00000561065 NDUFS3O75489 264 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 CCNYL3P0C7X3 344 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 MSL3P1P0C860 447 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 UGT2B7P16662 529 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 NR1D1P20393 614 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 ARNTP27540 789 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 CCR7P32248 378 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 RORAP35398 523 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 MAGEA6P43360 314 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 VPS41P49754 854 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 TRIP13Q15645 432 aaPredicted RBP15.44■□□□□ 0.06
LMX1B-204ENST00000561065 ZIC1Q15915 447 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 SYTL3Q4VX76 610 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 TMTC4Q5T4D3 741 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 RNF187Q5TA31 235 aaPredicted RBP15.44■□□□□ 0.06
LMX1B-204ENST00000561065 FAM69BQ5VUD6 431 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 SPESP1Q6UW49 350 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 FAM198BQ6UWH4 519 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 UNC5AQ6ZN44 842 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 CDHR3Q6ZTQ4 885 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 SYDE1Q6ZW31 735 aaPredicted RBP15.44■□□□□ 0.06
LMX1B-204ENST00000561065 LRRC6Q86X45 466 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 OTUD6BQ8N6M0 293 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 OR5K2Q8NHB8 316 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 C9orf43Q8TAL5 461 aaPredicted RBP15.44■□□□□ 0.06
LMX1B-204ENST00000561065 COG1Q8WTW3 980 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 ASZ1Q8WWH4 475 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 ABHD17AQ96GS6 310 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 KIFC1Q9BW19 673 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 FAM60AQ9NP50 221 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 MRFAP1Q9Y605 127 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 SEC16AO15027 2179 aa15.44■□□□□ 0.06
LMX1B-204ENST00000561065 FLNBO75369 2602 aaKnown RBP15.44■□□□□ 0.06
LMX1B-204ENST00000561065 C2orf74A8MZ97 194 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 H3BMH7 237 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms