RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 IL2P60568 153 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 TARDBPQ13148 414 aaKnown RBP eCLIP9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 EIF3IQ13347 325 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 PDAP1Q13442 181 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 RTP5Q14D33 572 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 ZKSCAN8Q15776 578 aaPredicted RBP9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 AMZ1Q400G9 498 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 UBAP2Q5T6F2 1119 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 NKAIN2Q5VXU1 208 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 TTC23LQ6PF05 361 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 IGF2-ASQ6U949 168 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 TMEM207Q6UWW9 146 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 ARHGAP22Q7Z5H3 698 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 CCDC91Q7Z6B0 441 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 B3GNT8Q7Z7M8 397 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 AMIGO1Q86WK6 493 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 CEP97Q8IW35 865 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 CPNE9Q8IYJ1 553 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 ADGRF3Q8IZF5 1079 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 NKAPQ8N5F7 415 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 GPATCH11Q8N954 259 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 OR4E2Q8NGC2 313 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 HMGCLL1Q8TB92 370 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 EEF1AKMT1Q8WVE0 214 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 SLC44A1Q8WWI5 657 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 LCN9Q8WX39 176 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 NCSTNQ92542 709 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 RSC1A1Q92681 617 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 FAM136AQ96C01 138 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 CD180Q99467 661 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 NUDT22Q9BRQ3 303 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 DHRS4Q9BTZ2 278 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 RAB11FIP5Q9BXF6 653 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 NRSN2Q9GZP1 204 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 SEMA6CQ9H3T2 930 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 RDH14Q9HBH5 336 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 ZNF180Q9UJW8 692 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 KLK13Q9UKR3 277 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 ATXN7L1Q9ULK2 861 aaPredicted RBP9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 ICKQ9UPZ9 632 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 NFS1Q9Y697 457 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 AKAP13Q12802 2813 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 CCDC187A0A096LP49 1063 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 HMX2A2RU54 273 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 MYO1CO00159 1063 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 RASGRF2O14827 1237 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 CAPN5O15484 640 aaPredicted RBP9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 ZBTB14O43829 449 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 FAM155BO75949 473 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 CATP04040 527 aaKnown RBP9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 C8GP07360 202 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 ITGA2BP08514 1039 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 STMN1P16949 149 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 TYRP1P17643 537 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 CNTFP26441 200 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 HSD17B2P37059 387 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 SLC26A3P40879 764 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 MLLT3P42568 568 aaPredicted RBP9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 SERPINB9P50453 376 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 RAB28P51157 221 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 INHBCP55103 352 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 CLDN6P56747 220 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 VSNL1P62760 191 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 PRKG2Q13237 762 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 SP140Q13342 867 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 SLC29A2Q14542 456 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 ARHGAP19Q14CB8 494 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 PLCL1Q15111 1095 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 ERCC6LQ2NKX8 1250 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 MAP9Q49MG5 647 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 ADGRD1Q6QNK2 874 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 PRSS42Q7Z5A4 293 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 OOSP2Q86WS3 158 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 KMT5CQ86Y97 462 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 OR9A1PQ8NGU1 263 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 OR2L8Q8NGY9 312 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 FLVCR1-AS1Q8TAF5 88 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 KLHL6Q8WZ60 621 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 ISL2Q96A47 359 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 TSPAN17Q96FV3 270 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 ZDHHC12Q96GR4 267 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 ATXN7L3BQ96GX2 97 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 ELMO2Q96JJ3 720 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 UBXN10Q96LJ8 280 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 HGH1Q9BTY7 390 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 SLC12A9Q9BXP2 914 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 B3GNT4Q9C0J1 378 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 STRADBQ9C0K7 418 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 SRMSQ9H3Y6 488 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 HRASLS2Q9NWW9 162 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 TMEM9Q9P0T7 183 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 SPATA7Q9P0W8 599 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 ANGPTL2Q9UKU9 493 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 NOVA2Q9UNW9 492 aaKnown RBP9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 CFAP47Q6ZTR5 3102 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 SDK2Q58EX2 2172 aa9.34□□□□□ -0.91
RABGGTA-221ENST00000561055 A0A1W2PNU3 283 aaPredicted RBP9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 OR6C74A6NCV1 312 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 ARHGEF33A8MVX0 844 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 BTN3A3O00478 584 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms