RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 UBAP2LQ14157 1087 aaKnown RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 HERC3Q15034 1050 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 FXNQ16595 210 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 GARNL3Q5VVW2 1013 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 TRMT10BQ6PF06 316 aaKnown RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 ZYG11AQ6WRX3 759 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 ARHGAP36Q6ZRI8 547 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SLC9B2Q86UD5 537 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SYT12Q8IV01 421 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 MYO1HQ8N1T3 1032 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CCDC33Q8N5R6 958 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CPSF7Q8N684 471 aaKnown RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 PPM1NQ8N819 430 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 ASB11Q8WXH4 323 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 KLHL4Q9C0H6 718 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 IL26Q9NPH9 171 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 VTI1BQ9UEU0 232 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 PRMT5O14744 637 aaPredicted RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 AXIN1O15169 862 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CD3EAPO15446 510 aaKnown RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 ITM2AO43736 263 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 NUDT21O43809 227 aaKnown RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 KLF8O95600 359 aaPredicted RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 JCHAINP01591 159 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SERPINE1P05121 402 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SMIM10L1P0DMW3 83 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 DGKAP23743 735 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 AVPR2P30518 371 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 PKLRP30613 574 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 IGFALSP35858 605 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 PIK3CBP42338 1070 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CPA2P48052 419 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 E2F1Q01094 437 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 DSC2Q02487 901 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 KDSRQ06136 332 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 GAS6Q14393 721 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 KIR2DS3Q14952 304 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 FASTKD1Q53R41 847 aaKnown RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SFT2D3Q587I9 215 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 TECRLQ5HYJ1 363 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CTSL3PQ5NE16 218 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 C1orf146Q5VVC0 180 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 LIPJQ5W064 366 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 IL31Q6EBC2 164 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SULT1C3Q6IMI6 304 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 EPGNQ6UW88 154 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 HACD2Q6Y1H2 254 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 PID1Q7Z2X4 250 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 ADAMTSL2Q86TH1 951 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 LGI4Q8N135 537 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 FBXW8Q8N3Y1 598 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 TMCO5AQ8N6Q1 288 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 GOLM1Q8NBJ4 401 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CD200R1Q8TD46 325 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CXorf40AQ8TE69 158 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 RNF138Q8WVD3 245 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CMTM5Q96DZ9 223 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 MTERF3Q96E29 417 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SMIM10Q96HG1 83 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CCDC138Q96M89 665 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 WDR92Q96MX6 357 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 KXD1Q9BQD3 176 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CENPKQ9BS16 269 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 APOOQ9BUR5 198 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 REPIN1Q9BWE0 567 aaKnown RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SPATA9Q9BWV2 254 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 FAM83DQ9H4H8 585 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 ZNF385DQ9H6B1 395 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 MPP6Q9NZW5 540 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 POMPQ9Y244 141 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 TMED5Q9Y3A6 229 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 NPIPB15A6NHN6 443 aaPredicted RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 LMO7DNF2Z398 122 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 H0YIV9 168 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 TXNDC9O14530 226 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 RASGRP1O95267 797 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SEMA4FO95754 770 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CEACAM5P06731 702 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SYPP08247 313 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 OR56A5P0C7T3 313 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CKMT1AP12532 417 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 DDX5P17844 614 aaKnown RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 ITGB6P18564 788 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 ITGAXP20702 1163 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 GLDCP23378 1020 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 AHRP35869 848 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 FRKP42685 505 aaPredicted RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 GABRA4P48169 554 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 DUSP3P51452 185 aaPredicted RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 ALDH18A1P54886 795 aaKnown RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SOX8P57073 446 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 IRX4P78413 519 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 B4GALNT1Q00973 533 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CSTF3Q12996 717 aaKnown RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 ELOAQ14241 798 aaKnown RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SEMA3AQ14563 771 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 MYBPC3Q14896 1274 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 ZIC1Q15915 447 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 PLK5Q496M5 336 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 FNDC3BQ53EP0 1204 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms