RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 TCEAL8Q8IYN2 117 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 ATAD1Q8NBU5 361 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 BPIFB6Q8NFQ5 453 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 OR6Q1Q8NGQ2 317 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 OR13J1Q8NGT2 312 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 SCAMP5Q8TAC9 235 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 SETD6Q8TBK2 473 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 ADAM32Q8TC27 787 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 PIK3R3Q92569 461 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 HPS1Q92902 700 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 GLMNQ92990 594 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 RNF34Q969K3 372 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 FBXO32Q969P5 355 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 TP53INP1Q96A56 240 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 BIRC7Q96CA5 298 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 TRMT2BQ96GJ1 504 aaKnown RBP8.4□□□□□ -1.06
CCDC33-209ENST00000560565 REXO5Q96IC2 774 aaKnown RBP8.4□□□□□ -1.06
CCDC33-209ENST00000560565 MUS81Q96NY9 551 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 PGLYRP2Q96PD5 576 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 PHF12Q96QT6 1004 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 SNX18Q96RF0 628 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 FICDQ9BVA6 458 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 DERL2Q9GZP9 239 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 LHPPQ9H008 270 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 RACGAP1Q9H0H5 632 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 RETREG1Q9H6L5 497 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 KAT8Q9H7Z6 458 aaKnown RBP8.4□□□□□ -1.06
CCDC33-209ENST00000560565 WDR6Q9NNW5 1121 aaKnown RBP8.4□□□□□ -1.06
CCDC33-209ENST00000560565 MID1IP1Q9NPA3 183 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 CCDC177Q9NQR7 707 aaPredicted RBP8.4□□□□□ -1.06
CCDC33-209ENST00000560565 DDIT4Q9NX09 232 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 KIAA1522Q9P206 1035 aaPredicted RBP8.4□□□□□ -1.06
CCDC33-209ENST00000560565 MAP10Q9P2G4 905 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 UXTQ9UBK9 157 aaPredicted RBP8.4□□□□□ -1.06
CCDC33-209ENST00000560565 OR12D3Q9UGF7 316 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 ENOPH1Q9UHY7 261 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 WBP11Q9Y2W2 641 aaKnown RBP8.4□□□□□ -1.06
CCDC33-209ENST00000560565 FIS1Q9Y3D6 152 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 GRIP1Q9Y3R0 1128 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 PEX16Q9Y5Y5 336 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 NOTCH4Q99466 2003 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 ANKRD36A6QL64 1941 aa8.4□□□□□ -1.06
CCDC33-209ENST00000560565 DENND4AQ7Z401 1863 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 NYNRINQ9P2P1 1898 aaKnown RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 PTPRZ1P23471 2315 aaPredicted RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 SLC38A8A6NNN8 435 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 CYSRT1A8MQ03 144 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 FXYD1O00168 92 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 PLOD2O00469 737 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 PRRG1O14668 218 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 PIP5K1BO14986 540 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 IRAK2O43187 625 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 MSI1O43347 362 aaKnown RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 TPST1O60507 370 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 XYLBO75191 536 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 USP12O75317 370 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 RSL1D1O76021 490 aaKnown RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 MYO1DO94832 1006 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 PAPLNO95428 1278 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 VNN2O95498 520 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 NADKO95544 446 aaPredicted RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 SNAP29O95721 258 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 OXSR1O95747 527 aaPredicted RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 NDST3O95803 873 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 JUNP05412 331 aaKnown RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 PRR35P0CG20 571 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 NELFEP18615 380 aaKnown RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 GGT1P19440 569 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 HLA-DPA1P20036 260 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 PTX3P26022 381 aaPredicted RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 HOXC13P31276 330 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 CCR1P32246 355 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 ADRA1AP35348 466 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 SOX6P35712 828 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 OPRL1P41146 370 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 RING1Q06587 406 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 TRAF3Q13114 568 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 PWP1Q13610 501 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 POU6F1Q14863 301 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 POLD3Q15054 466 aaPredicted RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 DDR2Q16832 855 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 UGT3A2Q3SY77 523 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 ANKDD1AQ495B1 522 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 RAB6CQ53S08 254 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 SYT6Q5T7P8 510 aaPredicted RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 ZNF691Q5VV52 312 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 ZNF544Q6NX49 715 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 XKRXQ6PP77 449 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 ISLR2Q6UXK2 745 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 RANBP10Q6VN20 620 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 USP43Q70EL4 1123 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 PTAR1Q7Z6K3 402 aaPredicted RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 SCD5Q86SK9 330 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 HEATR4Q86WZ0 1026 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 DCP2Q8IU60 420 aaKnown RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 FUNDC1Q8IVP5 155 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 CEP97Q8IW35 865 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 OFCC1Q8IZS5 231 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 PYROXD2Q8N2H3 581 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 FBXO39Q8N4B4 442 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms