RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ARMC6Q6NXE6 501 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 ZNF517Q6ZMY9 492 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-213ENST00000560175 PPP1R3BQ86XI6 285 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 ESX1Q8N693 406 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 SLC45A3Q96JT2 553 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 TRAPPC9Q96Q05 1148 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 OR2A14Q96R47 310 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 NAT9Q9BTE0 207 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 HGH1Q9BTY7 390 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 TUBB2BQ9BVA1 445 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 PDE7BQ9NP56 450 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 FGF21Q9NSA1 209 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 SAMD15Q9P1V8 674 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 VPS9D1Q9Y2B5 631 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 MED16Q9Y2X0 877 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 PCDHGA4Q9Y5G9 962 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 ATRXP46100 2492 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 LOC101059948A0A1B0GTJ6 334 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 PIPSLA2A3N6 862 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 SLC9B1P1A6NJY1 282 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 PRICKLE3O43900 615 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-213ENST00000560175 TIAF1O95411 115 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 EBLN1P0CF75 366 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 PKMP14618 531 aaKnown RBP12.79□□□□□ -0.36
SMAD3-213ENST00000560175 LIFP15018 202 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 ITGB6P18564 788 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 FMO4P31512 558 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 STAT5AP42229 794 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 ETF1P62495 437 aaKnown RBP12.79□□□□□ -0.36
SMAD3-213ENST00000560175 KCNAB1Q14722 419 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 LONRF1Q17RB8 773 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 MSS51Q4VC12 460 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 SYTL3Q4VX76 610 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 PWWP2BQ6NUJ5 590 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 HIBCHQ6NVY1 386 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-213ENST00000560175 CASC4Q6P4E1 433 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 SPESP1Q6UW49 350 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 VASH2Q86V25 355 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 RASGRP3Q8IV61 690 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 IL22RA1Q8N6P7 574 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 LINC01555Q8NAE3 123 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 ZNF669Q96BR6 464 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-213ENST00000560175 STAMBPL1Q96FJ0 436 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 CAPZA3Q96KX2 299 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 EBNA1BP2Q99848 306 aaKnown RBP12.79□□□□□ -0.36
SMAD3-213ENST00000560175 XKR8Q9H6D3 395 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 PLAC1Q9HBJ0 212 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 ACTR10Q9NZ32 417 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 GALPQ9UBC7 116 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 ASIC3Q9UHC3 531 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 RARRES3Q9UL19 164 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 CRYL1Q9Y2S2 319 aa12.79□□□□□ -0.36
SMAD3-213ENST00000560175 COL6A6A6NMZ7 2263 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 PIEZO2Q9H5I5 2752 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 H3BMH7 237 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 KDM1AO60341 852 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 NIPSNAP2O75323 286 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 C1orf105O95561 183 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 TTC4O95801 387 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 RECKO95980 971 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 RPN2P04844 631 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 ITGB2P05107 769 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 CHRM5P08912 532 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-213ENST00000560175 ST6GAL1P15907 406 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 PGAM1P18669 254 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 CDH3P22223 829 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 PEBP1P30086 187 aaKnown RBP12.78□□□□□ -0.36
SMAD3-213ENST00000560175 PKLRP30613 574 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 PAFAH1B1P43034 410 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 GABRA4P48169 554 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 RAB28P51157 221 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 CLCN7P51798 805 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 EIF3BP55884 814 aaKnown RBP12.78□□□□□ -0.36
SMAD3-213ENST00000560175 DR1Q01658 176 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 DHX9Q08211 1270 aaKnown RBP12.78□□□□□ -0.36
SMAD3-213ENST00000560175 ABRQ12979 859 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 CTBP1Q13363 440 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 TUBB3Q13509 450 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 KIR2DS3Q14952 304 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 TMED2Q15363 201 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 SLC5A12Q1EHB4 618 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 IZUMO3Q5VZ72 239 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 ZNF549Q6P9A3 640 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 FBXO38Q6PIJ6 1188 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 C6orf15Q6UXA7 325 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-213ENST00000560175 OTOAQ7RTW8 1153 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 GALNT7Q86SF2 657 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 IGDCC3Q8IVU1 814 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 DCUN1D3Q8IWE4 304 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 DENND6AQ8IWF6 608 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 CNTN4Q8IWV2 1026 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 HMGCLL1Q8TB92 370 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 CALML6Q8TD86 181 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 LRRC39Q96DD0 335 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 LRFN5Q96NI6 719 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 EFHD1Q9BUP0 239 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 ULBP3Q9BZM4 244 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 FAM117AQ9C073 453 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 ENAMQ9NRM1 1142 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 SPHK1Q9NYA1 384 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms