RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 NRF1Q16656 503 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 CYP51A1Q16850 503 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 IMPG1Q17R60 797 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 ATP13A5Q4VNC0 1218 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 RFTN2Q52LD8 501 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 USP39Q53GS9 565 aaKnown RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 NHSL2Q5HYW2 709 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 ATG9BQ674R7 924 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 ASTLQ6HA08 431 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 KRT80Q6KB66 452 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 SLC2A7Q6PXP3 512 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 DPY19L3Q6ZPD9 716 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 UBE2R2Q712K3 238 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 TMCO2Q7Z6W1 182 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 TMEM25Q86YD3 366 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 ADGRG2Q8IZP9 1017 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 TRAM1L1Q8N609 369 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 KLHL23Q8NBE8 558 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 DDHD1Q8NEL9 900 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 SP7Q8TDD2 431 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 MCOLN3Q8TDD5 553 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 BPIFB1Q8TDL5 484 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 WFIKKN2Q8TEU8 576 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 DIS3LQ8TF46 1054 aaKnown RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 ASB11Q8WXH4 323 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 TFAP2CQ92754 450 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 BIRC7Q96CA5 298 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 FBXL8Q96CD0 374 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 CMTM7Q96FZ5 175 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 METTL2AQ96IZ6 378 aaKnown RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 HIST1H2AHQ96KK5 128 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 RPL10LQ96L21 214 aaKnown RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 FCRL1Q96LA6 429 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 RDH12Q96NR8 316 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 SLC29A1Q99808 456 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 HIST1H2AJQ99878 128 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 H2AFJQ9BTM1 129 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 BDH2Q9BUT1 245 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 BBS2Q9BXC9 721 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 YTHDF1Q9BYJ9 559 aaKnown RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 TRIM4Q9C037 500 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 CLMPQ9H6B4 373 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 GORASP2Q9H8Y8 452 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 ACTR8Q9H981 624 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 SPHK2Q9NRA0 654 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 TDP1Q9NUW8 608 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 INTS7Q9NVH2 962 aaKnown RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 TUBA8Q9NY65 449 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 PTTG2Q9NZH5 202 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 DKK3Q9UBP4 350 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 ZNF490Q9ULM2 529 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 SLC8A2Q9UPR5 921 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 AURKCQ9UQB9 309 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 ERVW-1Q9UQF0 538 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 DMTF1Q9Y222 760 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 MYRFQ9Y2G1 1151 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 A0A0C4DFX4 3053 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 TRBV5-3A0A0A0MS03 114 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 ARHGAP10A1A4S6 786 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 TRIM43BA6NCK2 446 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 TRIM64A6NGJ6 449 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 UPK3BL1B0FP48 263 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 FAM220BPB1ANY3 271 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 LOC730098B7Z3J9 87 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 UPK3BL2E5RIL1 263 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 NEDD8-MDP1E9PL57 170 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 PSMD11O00231 422 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 SOCS2O14508 198 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 CCL16O15467 120 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 PRMT3O60678 531 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 SEC22BO75396 215 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 DEAF1O75398 565 aaPredicted RBP7.9□□□□□ -1.14
SMAD3-212ENST00000559937 MOSPD3O75425 235 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 SCELO95171 688 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 H6PDO95479 791 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 RAP2AP10114 183 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 HSD3B1P14060 373 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 ZNF23P17027 643 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 GJA1P17302 382 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 CKMT2P17540 419 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 IL1RNP18510 177 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 POLR2EP19388 210 aaKnown RBP7.9□□□□□ -1.14
SMAD3-212ENST00000559937 HSD3B2P26439 372 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 WEE1P30291 646 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 OXTRP30559 389 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 GSTT1P30711 240 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 NNMTP40261 264 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 PEX19P40855 299 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 CCR2P41597 374 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 CCR3P51677 355 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 OR4D2P58180 307 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 UBE3AQ05086 875 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 PCDH1Q08174 1060 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 CYP4F3Q08477 520 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 CSTF3Q12996 717 aaKnown RBP7.9□□□□□ -1.14
SMAD3-212ENST00000559937 DYNC1I2Q13409 638 aaKnown RBP7.9□□□□□ -1.14
SMAD3-212ENST00000559937 MAPKAPK3Q16644 382 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 LRRC26Q2I0M4 334 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 DPY19L1Q2PZI1 675 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 FAM98BQ52LJ0 330 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms