RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 ZNF45Q02386 682 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 NR6A1Q15406 480 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 BCL7AQ4VC05 210 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 TJAP1Q5JTD0 557 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 FBXO47Q5MNV8 452 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 NXNL2Q5VZ03 156 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 TUBA3EQ6PEY2 450 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 ZNF517Q6ZMY9 492 aaPredicted RBP4.97□□□□□ -1.61
HMG20A-204ENST00000558288 CILP2Q8IUL8 1156 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 P3H2Q8IVL5 708 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 ATG16L2Q8NAA4 619 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 COPS5Q92905 334 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 REXO5Q96IC2 774 aaKnown RBP4.97□□□□□ -1.61
HMG20A-204ENST00000558288 FCRL5Q96RD9 977 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 SNX18Q96RF0 628 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 TMEM209Q96SK2 561 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 BTBD2Q9BX70 525 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 BBS2Q9BXC9 721 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 PBX4Q9BYU1 374 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 ROGDIQ9GZN7 287 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 TTYH1Q9H313 450 aaPredicted RBP4.97□□□□□ -1.61
HMG20A-204ENST00000558288 RNF167Q9H6Y7 350 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 TREX1Q9NSU2 369 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 TOR4AQ9NXH8 423 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 CXXC1Q9P0U4 656 aaPredicted RBP4.97□□□□□ -1.61
HMG20A-204ENST00000558288 MARCH4Q9P2E8 410 aaPredicted RBP4.97□□□□□ -1.61
HMG20A-204ENST00000558288 FBXW11Q9UKB1 542 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 RNF6Q9Y252 685 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 SPEF1Q9Y4P9 236 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 SCN1AP35498 2009 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 CDH23Q9H251 3354 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 IGKV6-21A0A0C4DH24 114 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 A0A1W2PQ72 361 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 ELOVL7A1L3X0 281 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 MOXD2PA6NHM9 499 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 METTL15A6NJ78 407 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 ARVCFO00192 962 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 PRSS23O95084 383 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 TIMP1P01033 207 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 KRT6AP02538 564 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 KRT6BP04259 564 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 CA3P07451 260 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 NPR3P17342 541 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 AKAP5P24588 427 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 AZGP1P25311 298 aaKnown RBP4.97□□□□□ -1.61
HMG20A-204ENST00000558288 CD6P30203 668 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 RYKP34925 604 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 LIPAP38571 399 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 SLC15A1P46059 708 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 AGTR2P50052 363 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 SERPINH1P50454 418 aaKnown RBP4.97□□□□□ -1.61
HMG20A-204ENST00000558288 P2RX3P56373 397 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 ERVK-8P63133 956 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 TUBA1BP68363 451 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 SLC35A2P78381 396 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 GALK2Q01415 458 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 CHRNEQ04844 493 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 IL18R1Q13478 541 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 RAB30Q15771 203 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 AAK1Q2M2I8 961 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 RFX4Q33E94 735 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 SOWAHCQ53LP3 525 aaPredicted RBP4.97□□□□□ -1.61
HMG20A-204ENST00000558288 INTS6LQ5JSJ4 861 aaKnown RBP4.97□□□□□ -1.61
HMG20A-204ENST00000558288 LYPD8Q6UX82 237 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 TUBA1AQ71U36 451 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 PRSS48Q7RTY5 328 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 RAB43Q86YS6 212 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 HIPK1Q86Z02 1210 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 SLC38A6Q8IZM9 456 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 TCAIMQ8N3R3 496 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 B3GALNT2Q8NCR0 500 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 PJA1Q8NG27 643 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 GRPEL2Q8TAA5 225 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 ADAMTS19Q8TE59 1207 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 UBASH3BQ8TF42 649 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 TSPEARQ8WU66 669 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 RASSF5Q8WWW0 418 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 OMA1Q96E52 524 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 Q96MT0 163 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 PHOX2BQ99453 314 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 ZBTB18Q99592 522 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 GPR20Q99678 358 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 CENPOQ9BU64 300 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 COLEC11Q9BWP8 271 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 ZNF717Q9BY31 904 aaPredicted RBP4.97□□□□□ -1.61
HMG20A-204ENST00000558288 MRM3Q9HC36 420 aaKnown RBP4.97□□□□□ -1.61
HMG20A-204ENST00000558288 ANKHQ9HCJ1 492 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 CCNB1IP1Q9NPC3 277 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 SLC52A3Q9NQ40 469 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 SMPD4Q9NXE4 827 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 TAS2R9Q9NYW1 312 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 TEKT2Q9UIF3 430 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 FBXO10Q9UK96 956 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 FNDC3AQ9Y2H6 1198 aaKnown RBP4.97□□□□□ -1.61
HMG20A-204ENST00000558288 NAALAD2Q9Y3Q0 740 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 POLR3HQ9Y535 204 aaPredicted RBP4.97□□□□□ -1.61
HMG20A-204ENST00000558288 BRWD1Q9NSI6 2320 aa4.97□□□□□ -1.61
HMG20A-204ENST00000558288 PNMA8CA0A1B0GUJ8 204 aa4.96□□□□□ -1.61
HMG20A-204ENST00000558288 PABPN1LA6NDY0 278 aaKnown RBP4.96□□□□□ -1.61
HMG20A-204ENST00000558288 TEX28O15482 410 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms