RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 GIPC1O14908 333 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 KLK8O60259 260 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 LRP3O75074 770 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 PIAS2O75928 621 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 C1orf105O95561 183 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 VIPP01282 170 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 CELA2BP08218 269 aaPredicted RBP12.09□□□□□ -0.47
TPM1-209ENST00000558072 MTHFD1P11586 935 aaKnown RBP12.09□□□□□ -0.47
TPM1-209ENST00000558072 XRCC1P18887 633 aaPredicted RBP12.09□□□□□ -0.47
TPM1-209ENST00000558072 IMPDH1P20839 514 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 PDHA2P29803 388 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 MDH1P40925 334 aaKnown RBP12.09□□□□□ -0.47
TPM1-209ENST00000558072 CCT8P50990 548 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 BIRC2Q13490 618 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 PDK4Q16654 411 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 PPP1R3AQ16821 1122 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 KIF19Q2TAC6 998 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 TRIM61Q5EBN2 209 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 ANKS6Q68DC2 871 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 C16orf46Q6P387 395 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 IYDQ6PHW0 289 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 SLC30A9Q6PML9 568 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 SBSNQ6UWP8 590 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 NAPRTQ6XQN6 538 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 FAM83HQ6ZRV2 1179 aaPredicted RBP12.09□□□□□ -0.47
TPM1-209ENST00000558072 RASGRP3Q8IV61 690 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 VRK3Q8IV63 474 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 SPATA6LQ8N4H0 392 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 CHCHD4Q8N4Q1 142 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 SUMF1Q8NBK3 374 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 FAM46DQ8NEK8 389 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 OR9A1PQ8NGU1 263 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 MGARPQ8TDB4 240 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 PPP4R1Q8TF05 950 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 FBXL8Q96CD0 374 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 MAGEB18Q96M61 343 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 FERD3LQ96RJ6 166 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 LRRC61Q9BV99 259 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 PCBD2Q9H0N5 130 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 CAPN10Q9HC96 672 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 TM7SF3Q9NS93 570 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 ZNF358Q9NW07 568 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 CPSF2Q9P2I0 782 aaKnown RBP12.09□□□□□ -0.47
TPM1-209ENST00000558072 KLF15Q9UIH9 416 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 EMCNQ9ULC0 261 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 PDE10AQ9Y233 779 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 GON4LQ3T8J9 2241 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 SDK1Q7Z5N4 2213 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 A0A1B0GTQ1 180 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 FAM221BA6H8Z2 402 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 TK2O00142 265 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 ARHGAP33O14559 1287 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 KATNA1O75449 491 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 MLYCDO95822 493 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 SERPINE1P05121 402 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 ZNF883P0CG24 379 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 RPL10P27635 214 aaKnown RBP12.08□□□□□ -0.48
TPM1-209ENST00000558072 GGT5P36269 586 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 GMPRP36959 345 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 MPLP40238 635 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 ATP1A2P50993 1020 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 HERVK_113P63132 956 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 IRX4P78413 519 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 GALNT1Q10472 559 aaPredicted RBP12.08□□□□□ -0.48
TPM1-209ENST00000558072 NAA25Q14CX7 972 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 SETDB1Q15047 1291 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 PCBP2Q15366 365 aaKnown RBP eCLIP12.08□□□□□ -0.48
TPM1-209ENST00000558072 OR4D1Q15615 310 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 RPE65Q16518 533 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 KLHL35Q6PF15 583 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 RGS9BPQ6ZS82 235 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 TMEM151AQ8N4L1 468 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 AFAP1L2Q8N4X5 818 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 ZNF548Q8NEK5 533 aaPredicted RBP12.08□□□□□ -0.48
TPM1-209ENST00000558072 MAPK15Q8TD08 544 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 ZDHHC1Q8WTX9 485 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 CKAP2Q8WWK9 683 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 SLC22A18Q96BI1 424 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 L3HYPDHQ96EM0 354 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 CNDP1Q96KN2 507 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 RMDN2Q96LZ7 410 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 C1QTNF3Q9BXJ4 246 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 ERVK-6Q9BXR3 956 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 CCDC134Q9H6E4 229 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 KIR3DX1Q9H7L2 352 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 MANSC1Q9H8J5 431 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 UCK1Q9HA47 277 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 IL21RQ9HBE5 538 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 PRDM8Q9NQV8 689 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 IMP3Q9NV31 184 aaKnown RBP12.08□□□□□ -0.48
TPM1-209ENST00000558072 WWOXQ9NZC7 414 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 SIRPGQ9P1W8 387 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 TBC1D29Q9UFV1 150 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 TSR3Q9UJK0 312 aaKnown RBP12.08□□□□□ -0.48
TPM1-209ENST00000558072 ANGPTL3Q9Y5C1 460 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 SNX11Q9Y5W9 270 aa12.08□□□□□ -0.48
TPM1-209ENST00000558072 SRRM3A6NNA2 597 aaPredicted RBP12.07□□□□□ -0.48
TPM1-209ENST00000558072 A8MT66 165 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 ARHGEF33A8MVX0 844 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 G3V2L1 256 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms