RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 RAB7BQ96AH8 199 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 KLHL29Q96CT2 875 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 NUS1Q96E22 293 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 C3orf30Q96M34 536 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 FAM161BQ96MY7 647 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 KCNA7Q96RP8 456 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 GABRG3Q99928 467 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 TMEM79Q9BSE2 394 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 MKRN2Q9H000 416 aaKnown RBP7.22□□□□□ -1.25
SPG11-204ENST00000557866 SLC6A17Q9H1V8 727 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 TUBB1Q9H4B7 451 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 MEAF6Q9HAF1 191 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 KCNK12Q9HB15 430 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 SLC40A1Q9NP59 571 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 MID1IP1Q9NPA3 183 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 TRPV5Q9NQA5 729 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 TCF7L2Q9NQB0 619 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 DYRK4Q9NR20 520 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 UTP6Q9NYH9 597 aaKnown RBP7.22□□□□□ -1.25
SPG11-204ENST00000557866 GULP1Q9UBP9 304 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 TMCO1Q9UM00 188 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 SORCS3Q9UPU3 1222 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 FIS1Q9Y3D6 152 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 PCYT1BQ9Y5K3 369 aaPredicted RBP7.22□□□□□ -1.25
SPG11-204ENST00000557866 PTGDR2Q9Y5Y4 395 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 ST14Q9Y5Y6 855 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 SCN8AQ9UQD0 1980 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 A0A1W2PP55 124 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 SLC5A10A0PJK1 596 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 OR2AG2A6NM03 316 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 GFYI3L273 518 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 EIF3FO00303 357 aaPredicted RBP7.21□□□□□ -1.26
SPG11-204ENST00000557866 OR7A17O14581 309 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 AZIN1O14977 448 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 NPC1O15118 1278 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 RAD51BO15315 384 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 DCXO43602 365 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 AP1G1O43747 822 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 NARSO43776 548 aaKnown RBP7.21□□□□□ -1.26
SPG11-204ENST00000557866 SYNCRIPO60506 623 aaKnown RBP7.21□□□□□ -1.26
SPG11-204ENST00000557866 SNX2O60749 519 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 SKAP2O75563 359 aaPredicted RBP7.21□□□□□ -1.26
SPG11-204ENST00000557866 RASSF9O75901 435 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 SLCO2B1O94956 709 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 GUCA1CO95843 209 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 ASGR2P07307 311 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 MPC1LP0DKB6 136 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 ENO3P13929 434 aaPredicted RBP7.21□□□□□ -1.26
SPG11-204ENST00000557866 GLB1P16278 677 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 NCF2P19878 526 aaPredicted RBP7.21□□□□□ -1.26
SPG11-204ENST00000557866 C5AR1P21730 350 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 CALB2P22676 271 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 PTPN4P29074 926 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 NTSR1P30989 418 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 GPR1P46091 355 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 CPA2P48052 419 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 PRLHRP49683 370 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 RGS19P49795 217 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 ERVPABLB-1P60509 514 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 HSPA14Q0VDF9 509 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 SMAD4Q13485 552 aaKnown RBP7.21□□□□□ -1.26
SPG11-204ENST00000557866 LRP8Q14114 963 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 ZXDCQ2QGD7 858 aaPredicted RBP7.21□□□□□ -1.26
SPG11-204ENST00000557866 WSCD2Q2TBF2 565 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 BCL7AQ4VC05 210 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 PLEKHS1Q5SXH7 462 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 FBXW10Q5XX13 1052 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 KANK2Q63ZY3 851 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 LETMD1Q6P1Q0 360 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 TMEM220Q6QAJ8 160 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.21□□□□□ -1.26
SPG11-204ENST00000557866 ACAD11Q709F0 780 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 LARP4Q71RC2 724 aaKnown RBP eCLIP7.21□□□□□ -1.26
SPG11-204ENST00000557866 GOLGA7Q7Z5G4 137 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 PHYKPLQ8IUZ5 450 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 C10orf67Q8IYJ2 551 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 POU5F2Q8N7G0 328 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 OR52B6Q8NGF0 335 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 OR2T3Q8NH03 318 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 UBTD2Q8WUN7 234 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 ASB11Q8WXH4 323 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 FAM131CQ96AQ9 280 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 RHBDF1Q96CC6 855 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 COX14Q96I36 57 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 MARK4Q96L34 752 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 CATSPER2Q96P56 530 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 ASB2Q96Q27 587 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 ZNF382Q96SR6 550 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 HGH1Q9BTY7 390 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 TUBB6Q9BUF5 446 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 TBC1D10AQ9BXI6 508 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 SLC12A9Q9BXP2 914 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 FAM126AQ9BYI3 521 aaPredicted RBP7.21□□□□□ -1.26
SPG11-204ENST00000557866 RDH14Q9HBH5 336 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 SEMA4BQ9NPR2 832 aaPredicted RBP7.21□□□□□ -1.26
SPG11-204ENST00000557866 HEBP1Q9NRV9 189 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 TAS2R1Q9NYW7 299 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 ATXN10Q9UBB4 475 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 TAGLN3Q9UI15 199 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 G3BP2Q9UN86 482 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms