RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TEX264Q9Y6I9 313 aa3.02□□□□□ -1.93
TRAV28-201ENST00000557548 PTPRCP08575 1304 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 IGHV4-28A0A0C4DH34 117 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 C13orf42A0A1B0GVH6 325 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 HYKKA2RU49 373 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 GOLGA6L9A6NEM1 432 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 NEMP2A6NFY4 417 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 VWA5AO00534 786 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 CPLX1O14810 134 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 WISP2O76076 250 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 DDHD2O94830 711 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 LUC7L3O95232 432 aaKnown RBP3.01□□□□□ -1.93
TRAV28-201ENST00000557548 GUCA1CO95843 209 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 GSRP00390 522 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 PLGP00747 810 aaPredicted RBP3.01□□□□□ -1.93
TRAV28-201ENST00000557548 FGBP02675 491 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 LCATP04180 440 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 ALPPP05187 535 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 FGF2P09038 288 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 SMIM18P0DKX4 95 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 C8orf89P0DMQ9 161 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 ALPPL2P10696 532 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 VCLP18206 1134 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 C21orf33P30042 268 aaPredicted RBP3.01□□□□□ -1.93
TRAV28-201ENST00000557548 SSTR2P30874 369 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 CORO1AP31146 461 aaKnown RBP3.01□□□□□ -1.93
TRAV28-201ENST00000557548 PSMC4P43686 418 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 RABIFP47224 123 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 NUDT6P53370 316 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 GSDMDP57764 484 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 PRKAA1Q13131 559 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 PTGR1Q14914 329 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 PDK1Q15118 436 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 PTPN14Q15678 1187 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 FAM174BQ3ZCQ3 159 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 LACTB2Q53H82 288 aaPredicted RBP3.01□□□□□ -1.93
TRAV28-201ENST00000557548 FSCBQ5H9T9 825 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 TOR1AIP1Q5JTV8 583 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 FNBP1LQ5T0N5 605 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 C10orf25Q5T742 122 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 GRTP1Q5TC63 336 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 FAM69BQ5VUD6 431 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 OTUD1Q5VV17 481 aaPredicted RBP3.01□□□□□ -1.93
TRAV28-201ENST00000557548 FAM109BQ6ICB4 259 aaPredicted RBP3.01□□□□□ -1.93
TRAV28-201ENST00000557548 GALNT17Q6IS24 598 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 ISLR2Q6UXK2 745 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 PTF1AQ7RTS3 328 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 MRGPRGQ86SM5 289 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 SIAH3Q8IW03 269 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 SERPINA12Q8IW75 414 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 AQP12AQ8IXF9 295 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 ZNF34Q8IZ26 560 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 HDDC3Q8N4P3 179 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 OTUD6BQ8N6M0 293 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 THAP6Q8TBB0 222 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 SLC13A3Q8WWT9 602 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 DDB2Q92466 427 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 PRCCQ92733 491 aaPredicted RBP3.01□□□□□ -1.93
TRAV28-201ENST00000557548 DAZLQ92904 295 aaKnown RBP3.01□□□□□ -1.93
TRAV28-201ENST00000557548 AP2M1Q96CW1 435 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 SNRNP40Q96DI7 357 aaKnown RBP3.01□□□□□ -1.93
TRAV28-201ENST00000557548 C5orf30Q96GV9 206 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 URB1-AS1Q96HZ7 61 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 PANX3Q96QZ0 392 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 PRSS22Q9GZN4 317 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 PLAC1Q9HBJ0 212 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 SLCO1C1Q9NYB5 712 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 SPG21Q9NZD8 308 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 C1RLQ9NZP8 487 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 ACTR3BQ9P1U1 418 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 C11orf21Q9P2W6 132 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 IL36RNQ9UBH0 155 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 BLOC1S6Q9UL45 172 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 PIN4Q9Y237 131 aaKnown RBP3.01□□□□□ -1.93
TRAV28-201ENST00000557548 RPH3AQ9Y2J0 694 aaPredicted RBP3.01□□□□□ -1.93
TRAV28-201ENST00000557548 HBS1LQ9Y450 684 aaKnown RBP3.01□□□□□ -1.93
TRAV28-201ENST00000557548 SNX9Q9Y5X1 595 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 SPIN1Q9Y657 262 aaPredicted RBP3.01□□□□□ -1.93
TRAV28-201ENST00000557548 PRAG1Q86YV5 1406 aa3.01□□□□□ -1.93
TRAV28-201ENST00000557548 COL11A2P13942 1736 aaPredicted RBP3□□□□□ -1.93
TRAV28-201ENST00000557548 A0A1W2PPK0 400 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 RGSL1A5PLK6 1076 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 OR5K3A6NET4 321 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 KBTBD13C9JR72 458 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 FLRT2O43155 660 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 GPR137BO60478 399 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 PRAF2O60831 178 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 GLCEO94923 617 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 BMP10O95393 424 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 IGHV2-70P01814 119 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 ABHD2P08910 425 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 ANKRD34CP0C6C1 535 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 SAGP10523 405 aaPredicted RBP3□□□□□ -1.93
TRAV28-201ENST00000557548 HAPLN1P10915 354 aaPredicted RBP3□□□□□ -1.93
TRAV28-201ENST00000557548 MYL6BP14649 208 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 EPCAMP16422 314 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 IL10P22301 178 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 SLC6A6P31641 620 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 PTGER4P35408 488 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 HSD17B3P37058 310 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms