RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 ZNF569Q5MCW4 686 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 ZDHHC20Q5W0Z9 365 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 IYDQ6PHW0 289 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 ZNF574Q6ZN55 896 aaPredicted RBP9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 RNF111Q6ZNA4 994 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 BBS12Q6ZW61 710 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 B4GALNT4Q76KP1 1039 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 ZC3H18Q86VM9 953 aaKnown RBP9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 CCDC50Q8IVM0 306 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 NLGN4XQ8N0W4 816 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 PPM1NQ8N819 430 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 AVL9Q8NBF6 648 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 GPR26Q8NDV2 337 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 OR4D9Q8NGE8 314 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 PATE1Q8WXA2 126 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 HTR3CQ8WXA8 447 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 PLEKHG4BQ96PX9 1271 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 VPS35Q96QK1 796 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 SLC38A3Q99624 504 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 FERMT1Q9BQL6 677 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 CRB3Q9BUF7 120 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 SPATA16Q9BXB7 569 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 GOLPH3Q9H4A6 298 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 STN1Q9H668 368 aaKnown RBP9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 HACD3Q9P035 362 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 KLHL8Q9P2G9 620 aaPredicted RBP9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 ATXN10Q9UBB4 475 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 TFR2Q9UP52 801 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 SHOC2Q9UQ13 582 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 PCDHGB3Q9Y5G1 929 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 OAS3Q9Y6K5 1087 aaKnown RBP9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 UNC13CQ8NB66 2214 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 CELSR3Q9NYQ7 3312 aa9.67□□□□□ -0.86
HNRNPC-228ENST00000557033 BPTFQ12830 3046 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 IGHV1OR21-1A0A087WYE8 117 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 KIR2DS5A0A0G2JLQ3 304 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 A0A0G2JNG1 304 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 PMS2P1A4D2B8 440 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 APOC4-APOC2K7ER74 178 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 KIR2DS3K7RE56 304 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 CHUKO15111 745 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 PJA2O43164 708 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 VEGFDO43915 354 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 PPFIA2O75334 1257 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 ZNF189O75820 626 aaPredicted RBP9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 APOC2P02655 101 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 PIRTP0C851 137 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 F3P13726 295 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 MTHFD2P13995 350 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 ZNF8P17098 575 aaPredicted RBP9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 CD82P27701 267 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 CTNNA1P35221 906 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 CETN2P41208 172 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 CCT5P48643 541 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 NAP1L1P55209 391 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 WNT3AP56704 352 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 MPP3Q13368 585 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 KIR2DS5Q14953 304 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 PHF19Q5T6S3 580 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 TMEM71Q6P5X7 295 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 PAOXQ6QHF9 649 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 KDELC1Q6UW63 502 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 TMPRSS9Q7Z410 1059 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 ADGRG6Q86SQ4 1221 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 SLC9B2Q86UD5 537 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 ZNF567Q8N184 647 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 OR10G6Q8NH81 332 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 BRSK1Q8TDC3 778 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 SLC37A2Q8TED4 501 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 KRT35Q92764 455 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 GLYATL1Q969I3 302 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 WBP1Q96G27 269 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 BBC3Q96PG8 261 aaPredicted RBP9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 QKIQ96PU8 341 aaKnown RBP eCLIP9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 EPB41L1Q9H4G0 881 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 RDH14Q9HBH5 336 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 SARS2Q9NP81 518 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 SLC6A20Q9NP91 592 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 PDP2Q9P2J9 529 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 TBC1D29Q9UFV1 150 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 PISDQ9UG56 409 aa9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 PCYT1BQ9Y5K3 369 aaPredicted RBP9.66□□□□□ -0.86
HNRNPC-228ENST00000557033 KIF26BQ2KJY2 2108 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 ZFC3H1O60293 1989 aaKnown RBP9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 IGHV5-10-1A0A0J9YXX1 117 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 A6NCN8 305 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 H7C0C1 242 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 K7ENP7 123 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 KMOO15229 486 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 KCNJ13O60928 360 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 ANXA9O76027 345 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 TJP3O95049 919 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 EML2O95834 649 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 ACP5P13686 325 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 HGFP14210 728 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 HLA-DPA1P20036 260 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 FPR2P25090 351 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 CTNNA2P26232 953 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms