RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 RPN2P04844 631 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 KLK3P07288 261 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-222ENST00000556768 FGF5P12034 268 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 EPB42P16452 691 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 POLR2CP19387 275 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-222ENST00000556768 DLSTP36957 453 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 TTPAP49638 278 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 CDKN1CP49918 316 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-222ENST00000556768 RPS15P62841 145 aaKnown RBP7.13□□□□□ -1.27
SCFD1-222ENST00000556768 TUBB4BP68371 445 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 CYP4F2P78329 520 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 CDK16Q00536 496 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 SEMA5AQ13591 1074 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 TUBB2AQ13885 445 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 TBR1Q16650 682 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 PCID2Q5JVF3 399 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 TSTD2Q5T7W7 516 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 TTC23LQ6PF05 361 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 SDCCAG8Q86SQ7 713 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-222ENST00000556768 AMIGO1Q86WK6 493 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 UNC5BQ8IZJ1 945 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 MEIOBQ8N635 442 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 GPR150Q8NGU9 434 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 ASZ1Q8WWH4 475 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 SLC41A2Q96JW4 573 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 RANBP9Q96S59 729 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 MAP3K3Q99759 626 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 TUBB2BQ9BVA1 445 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 IL22Q9GZX6 179 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 C1GALT1Q9NS00 363 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 KCND1Q9NSA2 647 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 SIDT1Q9NXL6 827 aaKnown RBP7.13□□□□□ -1.27
SCFD1-222ENST00000556768 BAHCC1Q9P281 2608 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 SERTAD3Q9UJW9 196 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 ASF1AQ9Y294 204 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 ARHGEF17Q96PE2 2063 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-222ENST00000556768 CCDC162PA2VCL2 907 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 C2orf74A8MZ97 194 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 FAM87AP0C7U9 286 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 PRKAR1AP10644 381 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 CA5AP35218 305 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 STAT5AP42229 794 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 PREPP48147 710 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 NPY2RP49146 381 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 SESN2P58004 480 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-222ENST00000556768 NFATC3Q12968 1075 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 PRKG2Q13237 762 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 SRSF6Q13247 344 aaKnown RBP7.12□□□□□ -1.27
SCFD1-222ENST00000556768 BOP1Q14137 746 aaKnown RBP7.12□□□□□ -1.27
SCFD1-222ENST00000556768 BRD3Q15059 726 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 DBN1Q16643 649 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 PACS1Q6VY07 963 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 TMEM126BQ8IUX1 230 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 PIANPQ8IYJ0 282 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 D2HGDHQ8N465 521 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 OTUD6BQ8N6M0 293 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 GALNT6Q8NCL4 622 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 PHC3Q8NDX5 983 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 NAT14Q8WUY8 206 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 APOBEC4Q8WW27 367 aaKnown RBP7.12□□□□□ -1.27
SCFD1-222ENST00000556768 STARD8Q92502 1023 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 SLC12A9Q9BXP2 914 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 GPR87Q9BY21 358 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 SPRY4Q9C004 299 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 OR52A5Q9H2C5 316 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 ADNPQ9H2P0 1102 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 TFB2MQ9H5Q4 396 aaKnown RBP7.12□□□□□ -1.27
SCFD1-222ENST00000556768 EIF2B3Q9NR50 452 aaKnown RBP7.12□□□□□ -1.27
SCFD1-222ENST00000556768 LATS2Q9NRM7 1088 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 GEMIN8Q9NWZ8 242 aaKnown RBP7.12□□□□□ -1.27
SCFD1-222ENST00000556768 SEMA5BQ9P283 1151 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 JRKLQ9Y4A0 524 aa7.12□□□□□ -1.27
SCFD1-222ENST00000556768 LOC101059948A0A1B0GTJ6 334 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 PIPSLA2A3N6 862 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 C21orf140B9A014 251 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 KPNA5O15131 536 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 NKX2-8O15522 239 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 ZSCAN12O43309 604 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 SGTAO43765 313 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 NDUFS3O75489 264 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 SCRG1O75711 98 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 DLGAP3O95886 979 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 GOT2P00505 430 aaKnown RBP7.11□□□□□ -1.27
SCFD1-222ENST00000556768 NTRK1P04629 796 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 APOA4P06727 396 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 ETS1P14921 441 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 FOLR1P15328 257 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 PAMP19021 973 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 PSMA3P25788 255 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 PDHA2P29803 388 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 PRDX3P30048 256 aaKnown RBP7.11□□□□□ -1.27
SCFD1-222ENST00000556768 CXCR5P32302 372 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 SHMT2P34897 504 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 RPL22P35268 128 aaKnown RBP7.11□□□□□ -1.27
SCFD1-222ENST00000556768 HSPA14Q0VDF9 509 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 KCNAB1Q14722 419 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 PTRHD1Q6GMV3 140 aaKnown RBP7.11□□□□□ -1.27
SCFD1-222ENST00000556768 MRNIPQ6NTE8 343 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 PWWP2BQ6NUJ5 590 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 DUS1LQ6P1R4 473 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms