RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 TCN1P20061 433 aaPredicted RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 DDX6P26196 483 aaKnown RBP eCLIP5□□□□□ -1.615e-6■■■■■ 46.6
TMEM260-210ENST00000556422 HOXD9P28356 352 aaPredicted RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 CPOXP36551 454 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 AVPR1AP37288 418 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 IDH3AP50213 366 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 RASSF2P50749 326 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 NPTX1Q15818 432 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 RGS21Q2M5E4 152 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 LSM12Q3MHD2 195 aaKnown RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF470Q6ECI4 717 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 OR52E8Q6IFG1 317 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 DPPA2Q7Z7J5 298 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 TPRA1Q86W33 373 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 FSTL5Q8N475 847 aaPredicted RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 RBM15BQ8NDT2 890 aaKnown RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 SLC26A7Q8TE54 656 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 CHAC2Q8WUX2 184 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 RASSF5Q8WWW0 418 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 HPS1Q92902 700 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 PPM1MQ96MI6 270 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 ACE2Q9BYF1 805 aaPredicted RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 ARMC7Q9H6L4 198 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 UCK1Q9HA47 277 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 PLGRKTQ9HBL7 147 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 OR6C2Q9NZP2 312 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 THEGQ9P2T0 379 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 HSFX1Q9UBD0 423 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 PCDHGB4Q9UN71 923 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 RNF24Q9Y225 148 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 TRANK1O15050 2925 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 LOC285095A0A1B0GVY8 99 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 FAM95CA0A1B0GW59 222 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 HEATR9A2RTY3 570 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 ARGFXA6NJG6 315 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 SLC38A8A6NNN8 435 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF197O14709 1029 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 SLC9A3R1O14745 358 aaPredicted RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 LDB2O43679 373 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 MAN1A2O60476 641 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 PGLSO95336 258 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 GJB5O95377 273 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 WISP3O95389 354 aaPredicted RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 CRTAMO95727 393 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 ENO1P06733 434 aaKnown RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 HMGA1P17096 107 aaKnown RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 AOC1P19801 751 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 GLRBP48167 497 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 SGSHP51688 502 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 TAS2R39P59534 338 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 ACTR3P61158 418 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 BFSP2Q13515 415 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 ATP1A4Q13733 1029 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 MARC1Q5VT66 337 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 CYB5R2Q6BCY4 276 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 SLC22A25Q6T423 547 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5□□□□□ -1.61
TMEM260-210ENST00000556422 CFAP52Q8N1V2 620 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 SPATA6LQ8N4H0 392 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 SLC25A41Q8N5S1 370 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 ATP6V0D2Q8N8Y2 350 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 TRPV3Q8NET8 790 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 Q8NFD4 153 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 CA5BP1Q8WTZ4 195 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 STYXQ8WUJ0 223 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 RANBP9Q96S59 729 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 TMEM175Q9BSA9 504 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 GATA5Q9BWX5 397 aaPredicted RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 CWH43Q9H720 699 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 KRT84Q9NSB2 600 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 NSMCE4AQ9NXX6 385 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 UXTQ9UBK9 157 aaPredicted RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 AASSQ9UDR5 926 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 AURKCQ9UQB9 309 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 PCDHGB1Q9Y5G3 927 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF106Q9H2Y7 1883 aaKnown RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 PDE4DIPQ5VU43 2346 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 EYSQ5T1H1 3165 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 H3BM21 787 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 CCL22O00626 93 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 SMAD6O43541 496 aaKnown RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 FZD6O60353 706 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 PRAMEF11O60813 436 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 PQBP1O60828 265 aaKnown RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 RAMP2O60895 175 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 ADAM11O75078 769 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 MTX2O75431 263 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 SEC24AO95486 1093 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 ESRRBO95718 433 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 KLKB1P03952 638 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 JUNP05412 331 aaKnown RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 TPBGLP0DKB5 382 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 ACADSP16219 412 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 GNAZP19086 355 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 TACR2P21452 398 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 OR1E1P30953 314 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 PTDSS1P48651 473 aaKnown RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 CCL23P55773 120 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 SRP54P61011 504 aaKnown RBP5□□□□□ -1.61
TMEM260-210ENST00000556422 RAB10P61026 200 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms