RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 HGSO14964 777 aaPredicted RBP9.38□□□□□ -0.91
SRP54-210ENST00000556380 KPNA5O15131 536 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 BRINP1O60477 761 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 MPOP05164 745 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 APOA4P06727 396 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 AMD1P17707 334 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 ATP5DP30049 168 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 MAPK9P45984 424 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 CSE1LP55060 971 aaKnown RBP9.38□□□□□ -0.91
SRP54-210ENST00000556380 GFERP55789 205 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 GPX6P59796 221 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 PPP1CAP62136 330 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 ABRQ12979 859 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 EIF3IQ13347 325 aaKnown RBP9.38□□□□□ -0.91
SRP54-210ENST00000556380 GRB7Q14451 532 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 SYTL3Q4VX76 610 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 GLE1Q53GS7 698 aaKnown RBP9.38□□□□□ -0.91
SRP54-210ENST00000556380 PHF19Q5T6S3 580 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 RAB11FIP2Q7L804 512 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 OTOAQ7RTW8 1153 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 PLXDC1Q8IUK5 500 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 RASGRP3Q8IV61 690 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 TBC1D21Q8IYX1 336 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 ZBED8Q8IZ13 594 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 FBXO39Q8N4B4 442 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 CEP112Q8N8E3 955 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 BMPERQ8N8U9 685 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 RCBTB1Q8NDN9 531 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 ACVR1CQ8NER5 493 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 OR5AR1Q8NGP9 310 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 OR5K2Q8NHB8 316 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 GIMAP7Q8NHV1 300 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 GSDMBQ8TAX9 411 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 MDM1Q8TC05 714 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 PYROXD1Q8WU10 500 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 KCNJ9Q92806 393 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 NXPE2Q96DL1 559 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 C9orf72Q96LT7 481 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 SLC46A1Q96NT5 459 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 MCMBPQ9BTE3 642 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 AARSD1Q9BTE6 412 aaKnown RBP9.38□□□□□ -0.91
SRP54-210ENST00000556380 MENTQ9BUN1 341 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 STRADBQ9C0K7 418 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 CCDC86Q9H6F5 360 aaKnown RBP9.38□□□□□ -0.91
SRP54-210ENST00000556380 L2HGDHQ9H9P8 463 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 SAYSD1Q9NPB0 183 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 SMYD2Q9NRG4 433 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 DHRS7Q9Y394 339 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 LOXL2Q9Y4K0 774 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 CACNA1BQ00975 2339 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 OR6C74A6NCV1 312 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 OR5K3A6NET4 321 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 CDRT15L2A8MXV6 281 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 BTN3A3O00478 584 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 TOX3O15405 576 aaPredicted RBP9.37□□□□□ -0.91
SRP54-210ENST00000556380 TLX3O43711 291 aaPredicted RBP9.37□□□□□ -0.91
SRP54-210ENST00000556380 KIF1CO43896 1103 aaKnown RBP9.37□□□□□ -0.91
SRP54-210ENST00000556380 MATN4O95460 622 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 ANKRD34CP0C6C1 535 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 FGF3P11487 239 aaPredicted RBP9.37□□□□□ -0.91
SRP54-210ENST00000556380 CCL4P13236 92 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 HGFP14210 728 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 CHRM3P20309 590 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 CD9P21926 228 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 ECHS1P30084 290 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 ETV5P41161 510 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 MAGEA4P43358 317 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 GABREP78334 506 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 MGAT5Q09328 741 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 PRKG2Q13237 762 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 TMED2Q15363 201 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 ACSBG2Q5FVE4 666 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 C3orf38Q5JPI3 329 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 KLHL35Q6PF15 583 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 UNC5DQ6UXZ4 953 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 CYHR1Q6ZMK1 362 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 PRSS42Q7Z5A4 293 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 CLEC14AQ86T13 490 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 ADGRF3Q8IZF5 1079 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 LSMEM2Q8N112 164 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 MEIOBQ8N635 442 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 ZBTB2Q8N680 514 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 LRRN4CLQ8ND94 238 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 OR4E2Q8NGC2 313 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 OR52E1Q8NGJ3 308 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 KLHL6Q8WZ60 621 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 INPP5DQ92835 1189 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 FAM136AQ96C01 138 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 CMKLR1Q99788 373 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 TRIT1Q9H3H1 467 aaKnown RBP9.37□□□□□ -0.91
SRP54-210ENST00000556380 HRASLS2Q9NWW9 162 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 POLG2Q9UHN1 485 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 ICKQ9UPZ9 632 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 ASF1AQ9Y294 204 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 PSAT1Q9Y617 370 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 COMMD10Q9Y6G5 202 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 AK5Q9Y6K8 562 aa9.37□□□□□ -0.91
SRP54-210ENST00000556380 TCRBV9S1A1TA0A576 114 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 CXorf49A8MYA2 514 aaPredicted RBP9.36□□□□□ -0.91
SRP54-210ENST00000556380 B4E171 279 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms