RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 IL1RAPL1Q9NZN1 696 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 POLG2Q9UHN1 485 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 ICKQ9UPZ9 632 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 GSAPA4D1B5 854 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 K7ENP7 123 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 BTN3A1O00481 513 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 TTI1O43156 1089 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 KDM1AO60341 852 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 SEC31AO94979 1220 aaKnown RBP11.19□□□□□ -0.62
SLIRP-205ENST00000556310 ZBTB11O95625 1053 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-205ENST00000556310 TTC4O95801 387 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 RPN2P04844 631 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 CCNYL3P0C7X3 344 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 CASQ1P31415 396 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 FOXM1Q08050 763 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 DHX9Q08211 1270 aaKnown RBP11.19□□□□□ -0.62
SLIRP-205ENST00000556310 VAC14Q08AM6 782 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 THOC5Q13769 683 aaKnown RBP11.19□□□□□ -0.62
SLIRP-205ENST00000556310 IL11RAQ14626 422 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 CRYMQ14894 314 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 NR6A1Q15406 480 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 PLEKHS1Q5SXH7 462 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 INO80CQ6PI98 192 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-205ENST00000556310 UNC5DQ6UXZ4 953 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 OTOAQ7RTW8 1153 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 GPR155Q7Z3F1 870 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 VRK3Q8IV63 474 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 DCUN1D3Q8IWE4 304 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 SIDT2Q8NBJ9 832 aaKnown RBP11.19□□□□□ -0.62
SLIRP-205ENST00000556310 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.19□□□□□ -0.62
SLIRP-205ENST00000556310 CALML6Q8TD86 181 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 SNF8Q96H20 258 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 POM121Q96HA1 1249 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 OR6C1Q96RD1 312 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 FAM167BQ9BTA0 163 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 NAT9Q9BTE0 207 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 CPNE5Q9HCH3 593 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 PRM3Q9NNZ6 103 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 C1GALT1Q9NS00 363 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 C20orf96Q9NUD7 363 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-205ENST00000556310 PILRAQ9UKJ1 303 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 TMEM184BQ9Y519 407 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-205ENST00000556310 CACNA1GO43497 2377 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 ATMQ13315 3056 aa11.19□□□□□ -0.62
SLIRP-205ENST00000556310 TEX51A0A1B0GUA7 166 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 C2orf74A8MZ97 194 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 BTN3A3O00478 584 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 NDC80O14777 642 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 RAD1O60671 282 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 NIPSNAP2O75323 286 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 STK17BO94768 372 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 DLGAP3O95886 979 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 FGF5P12034 268 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 PKMP14618 531 aaKnown RBP11.18□□□□□ -0.62
SLIRP-205ENST00000556310 CDH3P22223 829 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 ATP5DP30049 168 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 FMO4P31512 558 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 SLC1A2P43004 574 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 ARL4DP49703 201 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 HSD11B2P80365 405 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 ACY1Q03154 408 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 TUBB3Q13509 450 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 GBX1Q14549 363 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.18□□□□□ -0.62
SLIRP-205ENST00000556310 MANEAQ5SRI9 462 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 HIBCHQ6NVY1 386 aaPredicted RBP11.18□□□□□ -0.62
SLIRP-205ENST00000556310 CCDC81Q6ZN84 652 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 VASH2Q86V25 355 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 DENND6AQ8IWF6 608 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 ADGRF3Q8IZF5 1079 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 CACNA2D3Q8IZS8 1091 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 PDIK1LQ8N165 341 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 D2HGDHQ8N465 521 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 GSDMBQ8TAX9 411 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 NKD1Q969G9 470 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 KRT12Q99456 494 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 NRTNQ99748 197 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 EBNA1BP2Q99848 306 aaKnown RBP11.18□□□□□ -0.62
SLIRP-205ENST00000556310 PITPNM3Q9BZ71 974 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 SPRY4Q9C004 299 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 TWSG1Q9GZX9 223 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 XKR8Q9H6D3 395 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 ACTR10Q9NZ32 417 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 OR6C2Q9NZP2 312 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 MAP10Q9P2G4 905 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 BTRCQ9Y297 605 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 CRYL1Q9Y2S2 319 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 TDRKHQ9Y2W6 561 aaKnown RBP11.18□□□□□ -0.62
SLIRP-205ENST00000556310 MRFAP1Q9Y605 127 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 FAM169AQ9Y6X4 670 aa11.18□□□□□ -0.62
SLIRP-205ENST00000556310 PIPSLA2A3N6 862 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 EFCAB8A8MWE9 144 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 E5RI56 91 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 BANF1O75531 89 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 EBLN1P0CF75 366 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 TPBGLP0DKB5 382 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 FOLR1P15328 257 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 PRDX3P30048 256 aaKnown RBP11.17□□□□□ -0.62
SLIRP-205ENST00000556310 PKLRP30613 574 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 RAB28P51157 221 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms