RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CAMK4Q16566 473 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 TMTC4Q5T4D3 741 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 ZNF324BQ6AW86 544 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-236ENST00000556220 ISM2Q6H9L7 571 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 WDR59Q6PJI9 974 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 IGFL2Q6UWQ7 119 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 WASH2PQ6VEQ5 465 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 SYTL1Q8IYJ3 562 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 NDUFAF2Q8N183 169 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 CXorf40BQ96DE9 158 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 CLIP3Q96DZ5 547 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 ZNF599Q96NL3 588 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 SMIM14Q96QK8 99 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 WDR24Q96S15 920 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 CD180Q99467 661 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 DHRS4Q9BTZ2 278 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 G6PC3Q9BUM1 346 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.66□□□□□ -1.34
ATXN3-236ENST00000556220 FAM207AQ9NSI2 230 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-236ENST00000556220 OLAHQ9NV23 265 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 P4HTMQ9NXG6 502 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 ATXN10Q9UBB4 475 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 VTI1BQ9UEU0 232 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 PADI2Q9Y2J8 665 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 NEU2Q9Y3R4 380 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 TRGV8A0A0C4DH27 118 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 A0A0J9YYE9 177 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 UBA6A0AVT1 1052 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-236ENST00000556220 TLCD2A6NGC4 264 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 SLC22A31A6NKX4 558 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 FADS2P1A8MWK0 482 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 MASP2O00187 686 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 LDB2O43679 373 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 PSPNO60542 156 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 ZBTB11O95625 1053 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-236ENST00000556220 FGFR1OPO95684 399 aaKnown RBP6.65□□□□□ -1.34
ATXN3-236ENST00000556220 PEX11BO96011 259 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 TRBC1P01850 177 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 CYP1A1P04798 512 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-236ENST00000556220 MMEP08473 750 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 ZNF7P17097 686 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-236ENST00000556220 AGAP20933 346 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 GPD1P21695 349 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 PBX1P40424 430 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 TDGF1P3P51864 188 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 ABRQ12979 859 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 DNTTIP2Q5QJE6 756 aaKnown RBP6.65□□□□□ -1.34
ATXN3-236ENST00000556220 HENMT1Q5T8I9 393 aaKnown RBP6.65□□□□□ -1.34
ATXN3-236ENST00000556220 AGAP9Q5VTM2 703 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 RPUSD3Q6P087 351 aaKnown RBP6.65□□□□□ -1.34
ATXN3-236ENST00000556220 KLHL35Q6PF15 583 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 FAM180AQ6UWF9 173 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 NOP9Q86U38 636 aaKnown RBP6.65□□□□□ -1.34
ATXN3-236ENST00000556220 PGBD5Q8N414 524 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 CHTF18Q8WVB6 975 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 GBP5Q96PP8 586 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 MGME1Q9BQP7 344 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 KRTAP4-2Q9BYR5 136 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 OR2AG1Q9H205 316 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 FAM83DQ9H4H8 585 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 ACTR5Q9H9F9 607 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-236ENST00000556220 TRIM39Q9HCM9 518 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 DNPEPQ9ULA0 475 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 DNAJC16Q9Y2G8 782 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 STAB1Q9NY15 2570 aa6.65□□□□□ -1.34
ATXN3-236ENST00000556220 RTTNQ86VV8 2226 aa6.65□□□□□ -1.35
ATXN3-236ENST00000556220 COL6A5A8TX70 2615 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 NBEAL1Q6ZS30 2694 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 CCDC78A2IDD5 438 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 RGSL1A5PLK6 1076 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 SIGLEC16A6NMB1 481 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 GPR89AB7ZAQ6 455 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 C9J4A7 227 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 EEF2KO00418 725 aaKnown RBP6.64□□□□□ -1.35
ATXN3-236ENST00000556220 CHUKO15111 745 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 KMOO15229 486 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 DAPK3O43293 454 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 CCP110O43303 1012 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 VEGFDO43915 354 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 MTA2O94776 668 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 ATE1O95260 518 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 LCA5LO95447 670 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 CLDN7O95471 211 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 INHBBP09529 407 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 GPR89BP0CG08 455 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 ERCC2P18074 760 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 AGXTP21549 392 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 IDSP22304 550 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 CA7P43166 264 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 KIR2DL2P43627 348 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-236ENST00000556220 SPINT3P49223 89 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 ZNF143P52747 638 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-236ENST00000556220 DRG2P55039 364 aaKnown RBP6.64□□□□□ -1.35
ATXN3-236ENST00000556220 GSCP56915 257 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-236ENST00000556220 ADCY2Q08462 1091 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 AIMP2Q13155 320 aaKnown RBP6.64□□□□□ -1.35
ATXN3-236ENST00000556220 IQCB1Q15051 598 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 PRKD1Q15139 912 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-236ENST00000556220 INSCQ1MX18 579 aa6.64□□□□□ -1.35
ATXN3-236ENST00000556220 PTCHD3Q3KNS1 767 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms