RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 NAF1Q96HR8 494 aaKnown RBP9.41□□□□□ -0.9
ACTN1-215ENST00000555616 LINC00615Q96LM1 132 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-215ENST00000555616 RBBP8Q99708 897 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 ZMYND15Q9H091 742 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 CCDC68Q9H2F9 335 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 RHOJQ9H4E5 214 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 FAM96AQ9H5X1 160 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 SLC40A1Q9NP59 571 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 FOXJ2Q9P0K8 574 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 SLC17A6Q9P2U8 582 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 LGALS13Q9UHV8 139 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 CORO1CQ9ULV4 474 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-215ENST00000555616 WDR37Q9Y2I8 494 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 PCDHGA3Q9Y5H0 932 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 PSAT1Q9Y617 370 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 UBA6A0AVT1 1052 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-215ENST00000555616 MGAT4DA6NG13 374 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 OR52A4PA6NMU1 304 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 B4E171 279 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 C9orf172C9J069 976 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 AGPSO00116 658 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 S1PR4O95977 384 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 VIPP01282 170 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 C9P02748 559 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 AHSGP02765 367 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 SNRPAP09012 282 aaKnown RBP9.4□□□□□ -0.9
ACTN1-215ENST00000555616 ANKRD34CP0C6C1 535 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 LIPCP11150 499 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 FGF3P11487 239 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-215ENST00000555616 CCL4P13236 92 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 KRT15P19012 456 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 MPSTP25325 297 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 ACRV1P26436 265 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 RPL10P27635 214 aaKnown RBP9.4□□□□□ -0.9
ACTN1-215ENST00000555616 CD82P27701 267 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 GCAP28676 217 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 CSTF2P33240 577 aaKnown RBP eCLIP9.4□□□□□ -0.9
ACTN1-215ENST00000555616 TSPAN7P41732 249 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 HALP42357 657 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 CAPZBP47756 277 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 PRLHRP49683 370 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 SLC12A2P55011 1212 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 MPP1Q00013 466 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 GPR18Q14330 331 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 NFE2L1Q14494 772 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 ITIH4Q14624 930 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 DBN1Q16643 649 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 BROXQ5VW32 411 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 TMEM220Q6QAJ8 160 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 ARHGAP22Q7Z5H3 698 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 LDB1Q86U70 411 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-215ENST00000555616 ZC3HC1Q86WB0 502 aaKnown RBP9.4□□□□□ -0.9
ACTN1-215ENST00000555616 PIANPQ8IYJ0 282 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 BMPERQ8N8U9 685 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 USP7Q93009 1102 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 SGF29Q96ES7 293 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 DCUN1D1Q96GG9 259 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 VPS39Q96JC1 886 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 COPS8Q99627 209 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 SH3GL2Q99962 352 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 DDA1Q9BW61 102 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 TBC1D10AQ9BXI6 508 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 FBXO6Q9NRD1 293 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-215ENST00000555616 ZDHHC3Q9NYG2 299 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 TBK1Q9UHD2 729 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 COMMD10Q9Y6G5 202 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 CFAP46Q8IYW2 2715 aa9.4□□□□□ -0.9
ACTN1-215ENST00000555616 ZFC3H1O60293 1989 aaKnown RBP9.4□□□□□ -0.9
ACTN1-215ENST00000555616 KALRNO60229 2985 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 ATRXP46100 2492 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 TEX51A0A1B0GUA7 166 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 TRIM49D1C9J1S8 452 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 H3BMM5 538 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 AGRPO00253 132 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 PRMT5O14744 637 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-215ENST00000555616 TOX3O15405 576 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-215ENST00000555616 FAM155BO75949 473 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 UBXN7O94888 489 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 HAUS5O94927 633 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 ESR1P03372 595 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 PRSS56P0CW18 603 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 MTHFD1P11586 935 aaKnown RBP9.39□□□□□ -0.91
ACTN1-215ENST00000555616 NSG1P42857 185 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 MAPK9P45984 424 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 CDKN1CP49918 316 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-215ENST00000555616 SERPINB8P50452 374 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 MAPK10P53779 464 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 ADARP55265 1226 aaKnown RBP9.39□□□□□ -0.91
ACTN1-215ENST00000555616 GFERP55789 205 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 RAB15P59190 212 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 CXADRP78310 365 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 SEMA3AQ14563 771 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 CLCA4Q14CN2 919 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 RPE65Q16518 533 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 ZNF658BQ4V348 819 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-215ENST00000555616 TMEM164Q5U3C3 297 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 METRNLQ641Q3 311 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 CNSTQ6PJW8 725 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 DET1Q7L5Y6 550 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 GPR155Q7Z3F1 870 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms