RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 FNBP1Q96RU3 617 aa2.97□□□□□ -1.93
SNX6-204ENST00000555541 ATP13A3Q9H7F0 1226 aa2.97□□□□□ -1.93
SNX6-204ENST00000555541 CHMP1AQ9HD42 196 aaPredicted RBP2.97□□□□□ -1.93
SNX6-204ENST00000555541 ZNF701Q9NV72 531 aaPredicted RBP2.97□□□□□ -1.93
SNX6-204ENST00000555541 LRWD1Q9UFC0 647 aa2.97□□□□□ -1.93
SNX6-204ENST00000555541 LNP1A1A4G5 178 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 F5H0A9 414 aaPredicted RBP2.96□□□□□ -1.94
SNX6-204ENST00000555541 USO1O60763 962 aaKnown RBP2.96□□□□□ -1.94
SNX6-204ENST00000555541 CREG1O75629 220 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 CLDN1O95832 211 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 ZSCAN5DPP0CG00 497 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 ACADMP11310 421 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 CAPN2P17655 700 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 MAPK4P31152 587 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 SLC6A6P31641 620 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 GARSP41250 739 aaKnown RBP2.96□□□□□ -1.94
SNX6-204ENST00000555541 GSDMDP57764 484 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 TRA2BP62995 288 aaKnown RBP2.96□□□□□ -1.94
SNX6-204ENST00000555541 DMPKQ09013 629 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 KRT33BQ14525 404 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 KLHL26Q53HC5 615 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 FIP1L1Q6UN15 594 aaKnown RBP2.96□□□□□ -1.94
SNX6-204ENST00000555541 GPRIN3Q6ZVF9 776 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 LRRTM1Q86UE6 522 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 LACC1Q8IV20 430 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 FAM114A1Q8IWE2 563 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 C11orf53Q8IXP5 236 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 TRIML1Q8N9V2 468 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 PAPD5Q8NDF8 572 aaKnown RBP2.96□□□□□ -1.94
SNX6-204ENST00000555541 OR13J1Q8NGT2 312 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 NSMCE3Q96MG7 304 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 KRT12Q99456 494 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 RTN4RQ9BZR6 473 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 HRH4Q9H3N8 390 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 KRT84Q9NSB2 600 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 OSER1Q9NX31 292 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 MTUS1Q9ULD2 1270 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 WDR37Q9Y2I8 494 aa2.96□□□□□ -1.94
SNX6-204ENST00000555541 HYKKA2RU49 373 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 PI4KAP2A4QPH2 592 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 PGPEP1LA6NFU8 196 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 LRRC72A6NJI9 287 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 HEPACAM2A8MVW5 462 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.95□□□□□ -1.94
SNX6-204ENST00000555541 RNASEH1O60930 286 aaKnown RBP2.95□□□□□ -1.94
SNX6-204ENST00000555541 DFFBO76075 338 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 MBD4O95243 580 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 UGT1A4P22310 534 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 CXCL9Q07325 125 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 AIMP2Q13155 320 aaKnown RBP2.95□□□□□ -1.94
SNX6-204ENST00000555541 DRP2Q13474 957 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 HLA-BQ31612 363 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 C2CD6Q53TS8 623 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 GORABQ5T7V8 394 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 OR2AJ1Q8NGZ0 328 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 MOSPD2Q8NHP6 518 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 GTF3AQ92664 365 aaKnown RBP2.95□□□□□ -1.94
SNX6-204ENST00000555541 AZIN2Q96A70 460 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 CCDC34Q96HJ3 373 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 BTBD10Q9BSF8 475 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 DPAGT1Q9H3H5 408 aa2.95□□□□□ -1.94
SNX6-204ENST00000555541 SEPT11Q9NVA2 429 aaKnown RBP2.95□□□□□ -1.94
SNX6-204ENST00000555541 LARSQ9P2J5 1176 aaKnown RBP2.95□□□□□ -1.94
SNX6-204ENST00000555541 KPNA7A9QM74 516 aa2.94□□□□□ -1.94
SNX6-204ENST00000555541 NXPH2O95156 264 aa2.94□□□□□ -1.94
SNX6-204ENST00000555541 PDX1P52945 283 aa2.94□□□□□ -1.94
SNX6-204ENST00000555541 HERV-K104P61576 105 aa2.94□□□□□ -1.94
SNX6-204ENST00000555541 GRAPQ13588 217 aa2.94□□□□□ -1.94
SNX6-204ENST00000555541 NR1D2Q14995 579 aa2.94□□□□□ -1.94
SNX6-204ENST00000555541 Q6ZRP5 223 aa2.94□□□□□ -1.94
SNX6-204ENST00000555541 KIRREL3Q8IZU9 778 aa2.94□□□□□ -1.94
SNX6-204ENST00000555541 IRGQQ8WZA9 623 aa2.94□□□□□ -1.94
SNX6-204ENST00000555541 LMF2Q9BU23 707 aaKnown RBP2.94□□□□□ -1.94
SNX6-204ENST00000555541 LRRC61Q9BV99 259 aa2.94□□□□□ -1.94
SNX6-204ENST00000555541 FTOQ9C0B1 505 aaKnown RBP eCLIP2.94□□□□□ -1.94
SNX6-204ENST00000555541 S1PR5Q9H228 398 aa2.94□□□□□ -1.94
SNX6-204ENST00000555541 KCNK15Q9H427 330 aa2.94□□□□□ -1.94
SNX6-204ENST00000555541 FGF21Q9NSA1 209 aa2.94□□□□□ -1.94
SNX6-204ENST00000555541 HACL1Q9UJ83 578 aa2.94□□□□□ -1.94
SNX6-204ENST00000555541 CCDC189A1A4V9 331 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 SOCS3O14543 225 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 PAPSS1O43252 624 aaPredicted RBP2.93□□□□□ -1.94
SNX6-204ENST00000555541 XRCC3O43542 346 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 OR10H2O60403 315 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 WDPCPO95876 746 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 DUX4L4P0CJ87 422 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 IGHV4-31P0DP07 118 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 VPREB1P12018 145 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 ACSL1P33121 698 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 HADHAP40939 763 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 PTGER3P43115 390 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 CCR10P46092 362 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 PGFP49763 221 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 LIMK2P53671 638 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 MFAP4P55083 255 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 GSCP56915 257 aaPredicted RBP2.93□□□□□ -1.94
SNX6-204ENST00000555541 HUNKP57058 714 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 DCAF7P61962 342 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 SIRPAP78324 504 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 TMF1P82094 1093 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms