RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CASP8Q14790 479 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 FAM83EQ2M2I3 478 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 PERM1Q5SV97 790 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 KLHL35Q6PF15 583 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 SPRED1Q7Z699 444 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 ADAMTSL2Q86TH1 951 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 ZNF761Q86XN6 746 aaPredicted RBP13.89□□□□□ -0.19
CHD8-208ENST00000555301 RASGRP3Q8IV61 690 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 SPNS2Q8IVW8 549 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 Q8N9G6 341 aaPredicted RBP13.89□□□□□ -0.19
CHD8-208ENST00000555301 OR52E1Q8NGJ3 308 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 OR10G6Q8NH81 332 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 MCOLN3Q8TDD5 553 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 ACMSDQ8TDX5 336 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 MZB1Q8WU39 189 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 LCN9Q8WX39 176 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 AHCYL2Q96HN2 611 aaKnown RBP13.89□□□□□ -0.19
CHD8-208ENST00000555301 HIST1H2AHQ96KK5 128 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 TSNARE1Q96NA8 513 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 ZIM3Q96PE6 472 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 HIST1H2AJQ99878 128 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 H2AFJQ9BTM1 129 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 RAB11FIP5Q9BXF6 653 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 TRIM54Q9BYV2 358 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 ABCG4Q9H172 646 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 PARVBQ9HBI1 364 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 NMRAL1Q9HBL8 299 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 DLL3Q9NYJ7 618 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 LGALS13Q9UHV8 139 aa13.89□□□□□ -0.19
CHD8-208ENST00000555301 NOVA2Q9UNW9 492 aaKnown RBP13.89□□□□□ -0.19
CHD8-208ENST00000555301 APOBEC2Q9Y235 224 aaKnown RBP13.89□□□□□ -0.19
CHD8-208ENST00000555301 IGHV1OR21-1A0A087WYE8 117 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 CCDC189A1A4V9 331 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 ARHGEF33A8MVX0 844 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 MYO1CO00159 1063 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 BTN3A1O00481 513 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 DUX1O43812 170 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 UBXN7O94888 489 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 KCNK5O95279 499 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 CD1DP15813 335 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 AMD1P17707 334 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 SHMT2P34897 504 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 RAB28P51157 221 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 OR1D5P58170 312 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 SIM1P81133 766 aaPredicted RBP13.88□□□□□ -0.19
CHD8-208ENST00000555301 CLPPQ16740 277 aaPredicted RBP13.88□□□□□ -0.19
CHD8-208ENST00000555301 KRT71Q3SY84 523 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.88□□□□□ -0.19
CHD8-208ENST00000555301 PPM1JQ5JR12 505 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 KLC3Q6P597 504 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 FBXO38Q6PIJ6 1188 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 LCA5Q86VQ0 697 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 AMIGO1Q86WK6 493 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 OR9A1PQ8NGU1 263 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 RUFY1Q96T51 708 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 TBC1D10AQ9BXI6 508 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 SRMSQ9H3Y6 488 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 TOR4AQ9NXH8 423 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 SPATA7Q9P0W8 599 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 LNPEPQ9UIQ6 1025 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 ADAMTS6Q9UKP5 1117 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 FAM186AA6NE01 2351 aa13.88□□□□□ -0.19
CHD8-208ENST00000555301 SPAARA0A1B0GVQ0 90 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 ZNF839A8K0R7 811 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 CDC7O00311 574 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 B4GAT1O43505 415 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 KLHL2O95198 593 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 RPLP0P05388 317 aaKnown RBP13.87□□□□□ -0.19
CHD8-208ENST00000555301 PROS1P07225 676 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 FTH1P19P0C7X4 201 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 HOXD11P31277 338 aaPredicted RBP13.87□□□□□ -0.19
CHD8-208ENST00000555301 HSD17B2P37059 387 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 PPM1FP49593 454 aaPredicted RBP13.87□□□□□ -0.19
CHD8-208ENST00000555301 AP1S2P56377 157 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 SQSTM1Q13501 440 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 GRB7Q14451 532 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 ACAP2Q15057 778 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 TSNAXIP1Q2TAA8 658 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 CEP85LQ5SZL2 805 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 SBSNQ6UWP8 590 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 FRA10AC1Q70Z53 315 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 HDXQ7Z353 690 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 OOSP2Q86WS3 158 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 CENPLQ8N0S6 344 aaPredicted RBP13.87□□□□□ -0.19
CHD8-208ENST00000555301 CYP4X1Q8N118 509 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 SPATA6LQ8N4H0 392 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 OR4E2Q8NGC2 313 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 STAG3L4Q8TBR4 150 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 KCTD4Q8WVF5 259 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 KIAA1191Q96A73 305 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 NXNL1Q96CM4 212 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 CCDC138Q96M89 665 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 DPYSL5Q9BPU6 564 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 LRRN3Q9H3W5 708 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 RDH14Q9HBH5 336 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 IGSF5Q9NSI5 407 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 OR6C2Q9NZP2 312 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 PDE10AQ9Y233 779 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 ZNF292O60281 2723 aa13.87□□□□□ -0.19
CHD8-208ENST00000555301 CABIN1Q9Y6J0 2220 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms