RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 TRIM73Q86UV7 250 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 CCDC25Q86WR0 208 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 ZFAND4Q86XD8 727 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 FAM129CQ86XR2 697 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 CTAGE4Q8IX94 777 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 FAM20CQ8IXL6 584 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 AGBL5Q8NDL9 886 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 OR5K2Q8NHB8 316 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 FLVCR1-AS1Q8TAF5 88 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 GSDMBQ8TAX9 411 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 CD200R1Q8TD46 325 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 CALML6Q8TD86 181 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 ZFPM2Q8WW38 1151 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 CRELD1Q96HD1 420 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 CMKLR1Q99788 373 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 DPYSL5Q9BPU6 564 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 TSSK1BQ9BXA7 367 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 KLHL25Q9H0H3 589 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 TRIT1Q9H3H1 467 aaKnown RBP11.99□□□□□ -0.49
SYNE2-214ENST00000554928 SRMSQ9H3Y6 488 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 TFB2MQ9H5Q4 396 aaKnown RBP11.99□□□□□ -0.49
SYNE2-214ENST00000554928 LATS2Q9NRM7 1088 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 EPG5Q9HCE0 2579 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 GSAPA4D1B5 854 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 E5RI56 91 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 F8W8V4 182 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 H3BMM5 538 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 RASSF9O75901 435 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 ANKRD34CP0C6C1 535 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 PVRP15151 417 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 CSTF2P33240 577 aaKnown RBP eCLIP11.98□□□□□ -0.49
SYNE2-214ENST00000554928 EIF2S3P41091 472 aaKnown RBP11.98□□□□□ -0.49
SYNE2-214ENST00000554928 PLOD1Q02809 727 aaPredicted RBP11.98□□□□□ -0.49
SYNE2-214ENST00000554928 MGAT5Q09328 741 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 COL9A2Q14055 689 aaPredicted RBP11.98□□□□□ -0.49
SYNE2-214ENST00000554928 FRG1Q14331 258 aaKnown RBP11.98□□□□□ -0.49
SYNE2-214ENST00000554928 TGIF1Q15583 401 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 KLHL38Q2WGJ6 581 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.98□□□□□ -0.49
SYNE2-214ENST00000554928 ANKS6Q68DC2 871 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 PIWIL4Q7Z3Z4 852 aaKnown RBP11.98□□□□□ -0.49
SYNE2-214ENST00000554928 TAX1BP1Q86VP1 789 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 AMIGO1Q86WK6 493 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 OOSP2Q86WS3 158 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 LMNTD2Q8IXW0 634 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 CPNE9Q8IYJ1 553 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 TBC1D21Q8IYX1 336 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 LINC01555Q8NAE3 123 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 SNIP1Q8TAD8 396 aaKnown RBP11.98□□□□□ -0.49
SYNE2-214ENST00000554928 PYROXD1Q8WU10 500 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 KLHL6Q8WZ60 621 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 FGF11Q92914 225 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 ZNF578Q96N58 590 aaPredicted RBP11.98□□□□□ -0.49
SYNE2-214ENST00000554928 OLFM1Q99784 485 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 TWSG1Q9GZX9 223 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 RAB33BQ9H082 229 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 ZNF768Q9H5H4 540 aaKnown RBP11.98□□□□□ -0.49
SYNE2-214ENST00000554928 SEMA5BQ9P283 1151 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 POMT2Q9UKY4 750 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 B3GALT1Q9Y5Z6 326 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 LAMA5O15230 3695 aa11.98□□□□□ -0.49
SYNE2-214ENST00000554928 ARHGEF33A8MVX0 844 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 PFDN6O15212 129 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 EIF3HO15372 352 aaKnown RBP eCLIP11.97□□□□□ -0.49
SYNE2-214ENST00000554928 C1orf105O95561 183 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 CHRM5P08912 532 aaPredicted RBP11.97□□□□□ -0.49
SYNE2-214ENST00000554928 HOXB1P14653 301 aaPredicted RBP11.97□□□□□ -0.49
SYNE2-214ENST00000554928 FOLR1P15328 257 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 MCM3P25205 808 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 PKLRP30613 574 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 MAGEA4P43358 317 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 MC2RQ01718 297 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 EFTUD2Q15029 972 aaKnown RBP eCLIP11.97□□□□□ -0.49
SYNE2-214ENST00000554928 KYNUQ16719 465 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 DNTTIP2Q5QJE6 756 aaKnown RBP11.97□□□□□ -0.49
SYNE2-214ENST00000554928 UNC5DQ6UXZ4 953 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 CYHR1Q6ZMK1 362 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 LSMEM2Q8N112 164 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 GPATCH11Q8N954 259 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 DENND1AQ8TEH3 1009 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 SKA2Q8WVK7 121 aaPredicted RBP11.97□□□□□ -0.49
SYNE2-214ENST00000554928 KCNJ9Q92806 393 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 ZDHHC12Q96GR4 267 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 ELMO2Q96JJ3 720 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 MCMBPQ9BTE3 642 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 LRRC4CQ9HCJ2 640 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 THSD1Q9NS62 852 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 SLC39A1Q9NY26 324 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 ACTR10Q9NZ32 417 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 VPS9D1Q9Y2B5 631 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 DHRS7Q9Y394 339 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 ZFHX4Q86UP3 3567 aa11.97□□□□□ -0.49
SYNE2-214ENST00000554928 ACACAQ13085 2346 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 TCRBV9S1A1TA0A576 114 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 TLCD2A6NGC4 264 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 SLC9B1P1A6NJY1 282 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 B4E171 279 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 NDC80O14777 642 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 KPNA5O15131 536 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 MATN4O95460 622 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms