RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 PIPSLA2A3N6 862 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 MGAT4DA6NG13 374 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 ERI2A8K979 691 aaKnown RBP10.29□□□□□ -0.76
SHMT2-215ENST00000554656 C21orf140B9A014 251 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 E7ESA3 106 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 MKRN2OSH3BPM6 223 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 ZSCAN5DPP0CG00 497 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 AKT1P31749 480 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 HSD17B3P37058 310 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 CD97P48960 835 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 MLLT10P55197 1068 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 ARL4CP56559 192 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 SARNPP82979 210 aaKnown RBP10.29□□□□□ -0.76
SHMT2-215ENST00000554656 XIAPP98170 497 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 CHAF1BQ13112 559 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 ITGA9Q13797 1035 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 PARP6Q2NL67 630 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 ZNF658BQ4V348 819 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-215ENST00000554656 BCL7AQ4VC05 210 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 ANKRD20A2Q5SQ80 823 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 ANKRD20A1Q5TYW2 823 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 PRAMEF17Q5VTA0 474 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 ANKRD20A3Q5VUR7 823 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 ITPRIPL1Q6GPH6 555 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 LCN10Q6JVE6 187 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 RANBP10Q6VN20 620 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 ARHGEF18Q6ZSZ5 1173 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 ASB18Q6ZVZ8 466 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 CENPUQ71F23 418 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 APLFQ8IW19 511 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-215ENST00000554656 KLHDC8BQ8IXV7 354 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 GOLGA6L1Q8N7Z2 621 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 OR4K2Q8NGD2 314 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 OR2L2Q8NH16 312 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 ZNF398Q8TD17 642 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 ZNF501Q96CX3 271 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-215ENST00000554656 C12orf66Q96MD2 445 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 FCRL4Q96PJ5 515 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 CD180Q99467 661 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 APOL2Q9BQE5 337 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 KIR3DX1Q9H7L2 352 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 PDE7BQ9NP56 450 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 EIF2B3Q9NR50 452 aaKnown RBP10.29□□□□□ -0.76
SHMT2-215ENST00000554656 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.29□□□□□ -0.76
SHMT2-215ENST00000554656 SLC24A2Q9UI40 661 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 MAN2B2Q9Y2E5 1009 aa10.29□□□□□ -0.76
SHMT2-215ENST00000554656 DNMT3AQ9Y6K1 912 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-215ENST00000554656 PRRC2CQ9Y520 2896 aaKnown RBP10.29□□□□□ -0.76
SHMT2-215ENST00000554656 RP1L1Q8IWN7 2480 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-215ENST00000554656 OR6C74A6NCV1 312 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 AGAP14A8MT82 685 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 CCL22O00626 93 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 STX7O15400 261 aaKnown RBP10.28□□□□□ -0.76
SHMT2-215ENST00000554656 PSMD3O43242 534 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 SRP72O76094 671 aaKnown RBP10.28□□□□□ -0.76
SHMT2-215ENST00000554656 RECKO95980 971 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 MT-ND3P03897 115 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 ABHD2P08910 425 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 CCNYL3P0C7X3 344 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 MSH3P20585 1137 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 LPOP22079 712 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-215ENST00000554656 PSMB4P28070 264 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 PTPN4P29074 926 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 UQCRFS1P47985 274 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 ZNF140P52738 457 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-215ENST00000554656 GEMP55040 296 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 HSD11B2P80365 405 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 BASP1P80723 227 aaKnown RBP10.28□□□□□ -0.76
SHMT2-215ENST00000554656 ACY1Q03154 408 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 ABRQ12979 859 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 TAF1AQ15573 450 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-215ENST00000554656 UAP1Q16222 522 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-215ENST00000554656 HIF1AQ16665 826 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 UGT8Q16880 541 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 HSP90B2PQ58FF3 399 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 FAM69BQ5VUD6 431 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 CAPRIN2Q6IMN6 1127 aaKnown RBP10.28□□□□□ -0.76
SHMT2-215ENST00000554656 DENND5AQ6IQ26 1287 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 ZNF517Q6ZMY9 492 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-215ENST00000554656 KMT5CQ86Y97 462 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 PDIK1LQ8N165 341 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 KRT222Q8N1A0 295 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 OR13C4Q8NGS5 318 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 UBLCP1Q8WVY7 318 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-215ENST00000554656 LRRC39Q96DD0 335 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 ZIM3Q96PE6 472 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 SH3GL2Q99962 352 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 TMEM109Q9BVC6 243 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 FSD1LQ9BXM9 530 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 XAB2Q9HCS7 855 aaKnown RBP10.28□□□□□ -0.76
SHMT2-215ENST00000554656 RAB6BQ9NRW1 208 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 HRASLS2Q9NWW9 162 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 BTRCQ9Y297 605 aa10.28□□□□□ -0.76
SHMT2-215ENST00000554656 HIVEP3Q5T1R4 2406 aa10.27□□□□□ -0.76
SHMT2-215ENST00000554656 UBA6A0AVT1 1052 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-215ENST00000554656 AP3B1O00203 1094 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 RIPK2O43353 540 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 CPNE3O75131 537 aaKnown RBP10.27□□□□□ -0.77
SHMT2-215ENST00000554656 ZBTB11O95625 1053 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-215ENST00000554656 TTC4O95801 387 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms