RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PNRC1Q12796 327 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-211ENST00000554437 KRT81Q14533 505 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 PKN2Q16513 984 aaKnown RBP4.67□□□□□ -1.66
SCFD1-211ENST00000554437 TMEM266Q2M3C6 531 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 ZC2HC1CQ53FD0 456 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-211ENST00000554437 MDH1BQ5I0G3 518 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 CCDC158Q5M9N0 1113 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 GRTP1Q5TC63 336 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 GARNL3Q5VVW2 1013 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 GPR139Q6DWJ6 353 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 CORO6Q6QEF8 472 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 FOXP4Q8IVH2 680 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-211ENST00000554437 CPSF7Q8N684 471 aaKnown RBP4.67□□□□□ -1.66
SCFD1-211ENST00000554437 TEX9Q8N6V9 391 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 PPFIBP2Q8ND30 876 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 MOSPD2Q8NHP6 518 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 NR4A3Q92570 626 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 MYADMQ96S97 322 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 GPATCH1Q9BRR8 931 aaKnown RBP4.67□□□□□ -1.66
SCFD1-211ENST00000554437 RHNO1Q9BSD3 238 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 EDEM3Q9BZQ6 932 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 TBC1D17Q9HA65 648 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 OSER1Q9NX31 292 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 ZNF624Q9P2J8 865 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-211ENST00000554437 SLC7A7Q9UM01 511 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 GRIP1Q9Y3R0 1128 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 WDR81Q562E7 1941 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 A0A0G2JLW4 131 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 hCG_1809904A0A1W2PP81 198 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 A0A1W2PPE2 198 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 A0A1W2PR64 198 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 A0A1W2PRB8 838 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 ANKUB1A6NFN9 424 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 PRR32B1ATL7 298 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 PCDH7O60245 1069 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 CSPG5O95196 566 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 TGDSO95455 350 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 PLGP00747 810 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-211ENST00000554437 IGHDP01880 384 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 AMBPP02760 352 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 IGHV4-38-2P0DP08 117 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 NR2F1P10589 423 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 STMN1P16949 149 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 DNASE1P24855 282 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 ATP5DP30049 168 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 KIF5BP33176 963 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 CDH13P55290 713 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 PRPF4BQ13523 1007 aaKnown RBP4.66□□□□□ -1.66
SCFD1-211ENST00000554437 SNAPC1Q16533 368 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 C1orf141Q5JVX7 400 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 OTUD3Q5T2D3 398 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-211ENST00000554437 CCDC91Q7Z6B0 441 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 KLHDC8BQ8IXV7 354 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 DNAJC22Q8N4W6 341 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 OR5M8Q8NGP6 311 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 GOT1L1Q8NHS2 421 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-211ENST00000554437 RNF128Q8TEB7 428 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 SLC47A1Q96FL8 570 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 SGK494Q96LW2 274 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 MS4A10Q96PG2 267 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 OLFM1Q99784 485 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 XAB2Q9HCS7 855 aaKnown RBP4.66□□□□□ -1.66
SCFD1-211ENST00000554437 SLC35C2Q9NQQ7 365 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 ADPRHL2Q9NX46 363 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 COQ3Q9NZJ6 369 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 RASAL2Q9UJF2 1139 aa4.66□□□□□ -1.66
SCFD1-211ENST00000554437 PA2G4Q9UQ80 394 aaKnown RBP4.66□□□□□ -1.66
SCFD1-211ENST00000554437 HYKKA2RU49 373 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 H0Y626 953 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 BLOC1S5-TXNDC5H3BN57 136 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 CPLX1O14810 134 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 ABCB1P08183 1280 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-211ENST00000554437 LIFP15018 202 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 TPD52P55327 224 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-211ENST00000554437 TUBB4BP68371 445 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 PPARDQ03181 441 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 UBXN1Q04323 297 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 ODF2Q5BJF6 829 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 CATSPER4Q7RTX7 472 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 ZNF554Q86TJ5 538 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 COMMD2Q86X83 199 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 OR8H3Q8N146 312 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 KCTD6Q8NC69 237 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 EXD1Q8NHP7 514 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 ZNF501Q96CX3 271 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-211ENST00000554437 DUX3Q96PT4 197 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 F2RL3Q96RI0 385 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 RTP3Q9BQQ7 232 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 LMF2Q9BU23 707 aaKnown RBP4.65□□□□□ -1.67
SCFD1-211ENST00000554437 CCDC106Q9BWC9 280 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 GOLPH3LQ9H4A5 285 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 RABEP2Q9H5N1 569 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 OPA3Q9H6K4 179 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 GDE1Q9NZC3 331 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 CRNNQ9UBG3 495 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-211ENST00000554437 MORF4L1Q9UBU8 362 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 ZFP37Q9Y6Q3 630 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-211ENST00000554437 FAM169AQ9Y6X4 670 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 SMCHD1A6NHR9 2005 aa4.65□□□□□ -1.67
SCFD1-211ENST00000554437 E9PI62 339 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms