RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 ZNF99A8MXY4 864 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 SUPT3HB4E1H0 165 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 KERAO60938 352 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 NIPSNAP2O75323 286 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 CLDN11O75508 207 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 GABARAPO95166 117 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 BMPR1AP36894 532 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 NR4A2P43354 598 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 HK3P52790 923 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 TPD52P55327 224 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 CLCQ05315 142 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 DAG1Q14118 895 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 PTPRNQ16849 979 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 COQ5Q5HYK3 327 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 CTSL3PQ5NE16 218 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 AFTPHQ6ULP2 937 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 GALNT13Q8IUC8 556 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 CLEC4FQ8N1N0 589 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 LSMEM1Q8N8F7 131 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 SIDT2Q8NBJ9 832 aaKnown RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 FUBP1Q96AE4 644 aaKnown RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 ESAMQ96AP7 390 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 RDH12Q96NR8 316 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 KCTD14Q9BQ13 255 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 TMEM175Q9BSA9 504 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 ALG2Q9H553 416 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 NEK6Q9HC98 313 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 POLE4Q9NR33 117 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 ARIH1Q9Y4X5 557 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 OAS3Q9Y6K5 1087 aaKnown RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 LAMA2P24043 3122 aaKnown RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 LCHNA4D1U4 455 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 NCF1BA6NI72 391 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 NCF1CA8MVU1 366 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 FXYD1O00168 92 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 NCF1P14598 390 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 CHRM3P20309 590 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 CAPN3P20807 821 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 CD40LGP29965 261 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 GSK3BP49841 420 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 GP2P55259 537 aaKnown RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 ELAVL2Q12926 359 aaKnown RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 EPS8Q12929 822 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 ZNF177Q13360 481 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 MAPK11Q15759 364 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 KIAA1841Q6NSI8 718 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 PROSER1Q86XN7 944 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 CLIP4Q8N3C7 705 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 EFHBQ8N7U6 833 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 Q8N9G6 341 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-207ENST00000553837 ZNF555Q8NEP9 628 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 RHOXF1Q8NHV9 184 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 RASSF5Q8WWW0 418 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 BIRC7Q96CA5 298 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 EID2BQ96D98 161 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 DACH2Q96NX9 599 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 NODALQ96S42 347 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 PCDH12Q9NPG4 1184 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 SMPD4Q9NXE4 827 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 TAS2R13Q9NYV9 303 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 POLG2Q9UHN1 485 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 RNF112Q9ULX5 631 aa12.01□□□□□ -0.49
SHMT2-207ENST00000553837 ANKRD66B4E2M5 251 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 NDUFS3O75489 264 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 INMTO95050 263 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 HPRP00739 348 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 ALPLP05186 524 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 RPS17P08708 135 aaKnown RBP12□□□□□ -0.49
SHMT2-207ENST00000553837 HTR1AP08908 422 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 HOXB8P17481 243 aaPredicted RBP12□□□□□ -0.49
SHMT2-207ENST00000553837 MC4RP32245 332 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 IFNA8P32881 189 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 CA5AP35218 305 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 ALDH7A1P49419 539 aaKnown RBP12□□□□□ -0.49
SHMT2-207ENST00000553837 NKX2-5P52952 324 aaPredicted RBP12□□□□□ -0.49
SHMT2-207ENST00000553837 LIPEQ05469 1076 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 CRY1Q16526 586 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 IMPG1Q17R60 797 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 DPY19L1Q2PZI1 675 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12□□□□□ -0.494e-7■□□□□ 9.3
SHMT2-207ENST00000553837 SLC51BQ86UW2 128 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 IFNEQ86WN2 208 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 FBXO39Q8N4B4 442 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 CHDHQ8NE62 594 aaPredicted RBP12□□□□□ -0.49
SHMT2-207ENST00000553837 STAG3L4Q8TBR4 150 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 BPIFB1Q8TDL5 484 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 PXYLP1Q8TE99 480 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 CHAC2Q8WUX2 184 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 SGCDQ92629 289 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 GLMNQ92990 594 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 TMEM125Q96AQ2 219 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 HHIPL1Q96JK4 782 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 RNF145Q96MT1 663 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 SLC22A12Q96S37 553 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 SEPHS2Q99611 448 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 DHRS9Q9BPW9 319 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 KLF16Q9BXK1 252 aaPredicted RBP12□□□□□ -0.49
SHMT2-207ENST00000553837 TRIM8Q9BZR9 551 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 HMX1Q9NP08 348 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms