RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 MPP1Q00013 466 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 SETQ01105 290 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-210ENST00000553693 ZNF239Q16600 458 aaKnown RBP3.44□□□□□ -1.86
SCFD1-210ENST00000553693 XKR6Q5GH73 641 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 GRTP1Q5TC63 336 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 SNX30Q5VWJ9 437 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 CHST9Q7L1S5 443 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 CEP295NLQ96MC4 621 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 FUCA2Q9BTY2 467 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 ITPAQ9BY32 194 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 RTN4RQ9BZR6 473 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 KRT84Q9NSB2 600 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 RNF186Q9NXI6 227 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.44□□□□□ -1.863e-6■□□□□ 10.2
SCFD1-210ENST00000553693 KIAA0556O60303 1618 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 NOTCH2Q04721 2471 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 YEATS2Q9ULM3 1422 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 ABCA8O94911 1581 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 FRMPD1Q5SYB0 1578 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 A0A087X0M5 115 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 A0A1B0GX30 115 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 A0A1W2PR77 199 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 J3KRW8 73 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 GAPDHSO14556 408 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-210ENST00000553693 TO15178 435 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 SSX4O60224 188 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 KHDRBS3O75525 346 aaKnown RBP3.43□□□□□ -1.86
SCFD1-210ENST00000553693 NXPH2O95156 264 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 OR2C1O95371 312 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 MOCS3O95396 460 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 ACADMP11310 421 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 VPREB1P12018 145 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 CA4P22748 312 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 SLC6A6P31641 620 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 LMOD3Q0VAK6 560 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 FAM98BQ52LJ0 330 aaKnown RBP3.43□□□□□ -1.86
SCFD1-210ENST00000553693 MDH1BQ5I0G3 518 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 INTS8Q75QN2 995 aaKnown RBP3.43□□□□□ -1.86
SCFD1-210ENST00000553693 LRRTM1Q86UE6 522 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 PIGZQ86VD9 579 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 WDTC1Q8N5D0 677 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 NIPA2Q8N8Q9 360 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 AMER3Q8N944 861 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 TEX19Q8NA77 164 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 PAPD5Q8NDF8 572 aaKnown RBP3.43□□□□□ -1.86
SCFD1-210ENST00000553693 KBTBD8Q8NFY9 601 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 OR5AP2Q8NGF4 316 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 RNF128Q8TEB7 428 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 ERLEC1Q96DZ1 483 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 ZNF300Q96RE9 604 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-210ENST00000553693 KRT12Q99456 494 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 PKP2Q99959 881 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 VN1R1Q9GZP7 353 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 GRIP1Q9Y3R0 1128 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 STRCQ7RTU9 1775 aa3.43□□□□□ -1.86
SCFD1-210ENST00000553693 ASTN2O75129 1339 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-210ENST00000553693 SOS1Q07889 1333 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-210ENST00000553693 ZNF644Q9H582 1327 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-210ENST00000553693 ATP10BO94823 1461 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 SIGLEC1Q9BZZ2 1709 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 LTBP4Q8N2S1 1624 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 LRRC72A6NJI9 287 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-210ENST00000553693 MITFO75030 526 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-210ENST00000553693 HSP90AA1P07900 732 aaKnown RBP3.42□□□□□ -1.86
SCFD1-210ENST00000553693 CLTBP09497 229 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 CSRP3P50461 194 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 GSDMDP57764 484 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 HERV-K104P61576 105 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 PNRC1Q12796 327 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-210ENST00000553693 KRT32Q14532 448 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 DLG2Q15700 870 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 SNAI3Q3KNW1 292 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 FASTKD1Q53R41 847 aaKnown RBP3.42□□□□□ -1.86
SCFD1-210ENST00000553693 WLSQ5T9L3 541 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 FIP1L1Q6UN15 594 aaKnown RBP3.42□□□□□ -1.86
SCFD1-210ENST00000553693 CLEC17AQ6ZS10 378 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 OR4C3Q8NH37 302 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 USP6NLQ92738 828 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 NSMCE3Q96MG7 304 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 HRH4Q9H3N8 390 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 ZHX3Q9H4I2 956 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 A4GALTQ9NPC4 353 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 ERAP1Q9NZ08 941 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 GRID1Q9ULK0 1009 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 WDR37Q9Y2I8 494 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 RIPK3Q9Y572 518 aa3.42□□□□□ -1.86
SCFD1-210ENST00000553693 NEO1Q92859 1461 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 ABCA9Q8IUA7 1624 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 KPNA7A9QM74 516 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 F5H0A9 414 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-210ENST00000553693 RNASEH1O60930 286 aaKnown RBP3.41□□□□□ -1.86
SCFD1-210ENST00000553693 GPIP06744 558 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 MMP9P14780 707 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 TM4SF1P30408 202 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 CCR10P46092 362 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 ARSEP51690 589 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 HUNKP57058 714 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 AIMP2Q13155 320 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms