RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 DPY30Q9C005 99 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 NKX2-4Q9H2Z4 354 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 CLMPQ9H6B4 373 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 LRTM1Q9HBL6 345 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 MSRAQ9UJ68 235 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 FADS3Q9Y5Q0 445 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 PRSS21Q9Y6M0 314 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 CROCCQ5TZA2 2017 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 TRAV19A0A0A6YYK7 116 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 LINC01553A4QN01 128 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 FAM149AA5PLN7 773 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 PABPN1LA6NDY0 278 aaKnown RBP12.64□□□□□ -0.39
SHMT2-205ENST00000553474 PDLIM1O00151 329 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 MANBAO00462 879 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 EI24O14681 340 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 TPST1O60507 370 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 ERN1O75460 977 aaKnown RBP12.64□□□□□ -0.39
SHMT2-205ENST00000553474 TRMUO75648 421 aaKnown RBP12.64□□□□□ -0.39
SHMT2-205ENST00000553474 RSL1D1O76021 490 aaKnown RBP12.64□□□□□ -0.39
SHMT2-205ENST00000553474 SCELO95171 688 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 MPC1LP0DKB6 136 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 PRPS2P11908 318 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 NFKBIAP25963 317 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 GABRR2P28476 465 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 MAPK1P28482 360 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 OR4D2P58180 307 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 POLR2LP62875 67 aaKnown RBP12.64□□□□□ -0.39
SHMT2-205ENST00000553474 GBX1Q14549 363 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 ATG9BQ674R7 924 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 CRTC1Q6UUV9 634 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 CCDC149Q6ZUS6 474 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 NEK10Q6ZWH5 1172 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 PLPP6Q8IY26 295 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 DTWD1Q8N5C7 304 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 CLDN19Q8N6F1 224 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 DCBLD1Q8N8Z6 715 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 OR2T12Q8NG77 320 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 LKAAEAR1Q8TD35 194 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-205ENST00000553474 RNF145Q96MT1 663 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 ZNF583Q96ND8 569 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 APOL5Q9BWW9 433 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 SLC12A9Q9BXP2 914 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 SUV39H2Q9H5I1 410 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 CERS4Q9HA82 394 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 PKD2L2Q9NZM6 624 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 ZNF490Q9ULM2 529 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-205ENST00000553474 SNX6Q9UNH7 406 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 COLQQ9Y215 455 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-205ENST00000553474 NUAK1O60285 661 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 POP4O95707 220 aaKnown RBP12.63□□□□□ -0.39
SHMT2-205ENST00000553474 ASLP04424 464 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 PGRP06401 933 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 RETP07949 1114 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 HIST1H2AGP0C0S8 130 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-205ENST00000553474 SRCP12931 536 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 NCK1P16333 377 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 HIST1H2ADP20671 130 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 RPIAP49247 311 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 ALDH3A2P51648 485 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 AP1S2P56377 157 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 BOP1Q14137 746 aaKnown RBP12.63□□□□□ -0.39
SHMT2-205ENST00000553474 MYBPC3Q14896 1274 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 RAB30Q15771 203 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 ZBED5Q49AG3 693 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 CYBRD1Q53TN4 286 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 PLEKHS1Q5SXH7 462 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 PPP2R2DQ66LE6 453 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 ZNF786Q8N393 782 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 SVOPLQ8N434 492 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 OR6K2Q8NGY2 324 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 ZNF420Q8TAQ5 688 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-205ENST00000553474 HIST1H2AHQ96KK5 128 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 CNDP2Q96KP4 475 aaKnown RBP12.63□□□□□ -0.39
SHMT2-205ENST00000553474 PPM1MQ96MI6 270 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 HIST1H2AJQ99878 128 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 H2AFJQ9BTM1 129 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 MAGIXQ9H6Y5 334 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 RMND5AQ9H871 391 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 PARVBQ9HBI1 364 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 DDX18Q9NVP1 670 aaKnown RBP12.63□□□□□ -0.39
SHMT2-205ENST00000553474 CFAP97Q9P2B7 532 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 KLQ9UEF7 1012 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 ZMYM5Q9UJ78 669 aa12.63□□□□□ -0.39
SHMT2-205ENST00000553474 A0A0U1RQS6 177 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 NPIPB15A6NHN6 443 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-205ENST00000553474 QSOX1O00391 747 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 GRM6O15303 877 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 TEX28O15482 410 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 LILRB3O75022 631 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 SEC22BO75396 215 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 LRG1P02750 347 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 ALBP02768 609 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 ZNF30P17039 623 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 UGT1A6P19224 532 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 UGT1A1P22309 533 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 UGT1A4P22310 534 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 UGT1A3P35503 534 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 UGT1A5P35504 534 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 ARSFP54793 590 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms