RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PM20D1Q6GTS8 502 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 DPY19L2P1Q6NXN4 242 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 MZT2BQ6NZ67 158 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 SLC22A25Q6T423 547 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 DHRS13Q6UX07 377 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 RANBP10Q6VN20 620 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 CLEC20AQ6ZU45 233 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 DENND5BQ6ZUT9 1274 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 LPCAT2Q7L5N7 544 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 TRAPPC11Q7Z392 1133 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 R3HCC1LQ7Z5L2 792 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 TBC1D1Q86TI0 1168 aaPredicted RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 TMEM200AQ86VY9 491 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 SFR1Q86XK3 245 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 DCP1BQ8IZD4 617 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 SLC25A45Q8N413 288 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 GALNT4Q8N4A0 578 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 DEFB119Q8N690 84 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 EXD3Q8N9H8 876 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 TNIP2Q8NFZ5 429 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 SCFD1Q8WVM8 642 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 SORCS1Q8WY21 1168 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 WASF1Q92558 559 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 LARP4BQ92615 738 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 SAAL1Q96ER3 474 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF764Q96H86 408 aaPredicted RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 TIGD1Q96MW7 591 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 C7orf26Q96N11 449 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 PLIN2Q99541 437 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 SEPT5Q99719 369 aaPredicted RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 TIMP4Q99727 224 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 MACROD1Q9BQ69 325 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 SYT15Q9BQS2 421 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 HDHD5Q9BXW7 423 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 MTMR12Q9C0I1 747 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 INTS2Q9H0H0 1204 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 PCED1AQ9H1Q7 454 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 SLITRK6Q9H5Y7 841 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 C6orf106Q9H6K1 298 aaPredicted RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 RPF1Q9H9Y2 349 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 PARVGQ9HBI0 331 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 DDX43Q9NXZ2 648 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 ASIC5Q9NY37 505 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 LARSQ9P2J5 1176 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 KLQ9UEF7 1012 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 CHORDC1Q9UHD1 332 aaPredicted RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 TLK1Q9UKI8 766 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 AGO2Q9UKV8 859 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 ITGA11Q9UKX5 1188 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 CDH9Q9ULB4 789 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 MYRFQ9Y2G1 1151 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 PCDHGA1Q9Y5H4 931 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 OR51B4Q9Y5P0 310 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 CSMD2Q7Z408 3487 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 MUC22E2RYF6 1773 aaPredicted RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 NUP205Q92621 2012 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 CELSR1Q9NYQ6 3014 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 ANAPC1Q9H1A4 1944 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 PTPRBP23467 1997 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 OBSL1O75147 1896 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 PDCD11Q14690 1871 aaKnown RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 APCP25054 2843 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 POLQO75417 2590 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 SETD2Q9BYW2 2564 aaPredicted RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 A0A1B0GVT2 93 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 TCRBV21S2A2A0A5A6 115 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 FAM149AA5PLN7 773 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 GOLGA8IPA6NC78 632 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 GAGE10A6NGK3 116 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 GOLGA8JA6NMD2 632 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 CDRT15L2A8MXV6 281 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 TARM1B6A8C7 271 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 B8ZZF3 427 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 F5H0A9 414 aaPredicted RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 TULP2O00295 520 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 VILLO15195 856 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 AP5Z1O43299 807 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 TNFSF14O43557 240 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 RAMP2O60895 175 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF821O75541 412 aaPredicted RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 RNF8O76064 485 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 TMEM63AO94886 807 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 NFATC1O95644 943 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 CD160O95971 181 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ASS1P00966 412 aaKnown RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 IGLV3-25P01717 112 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 CHRM5P08912 532 aaPredicted RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 LYL1P12980 280 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 WT1P19544 449 aaPredicted RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 CAPN3P20807 821 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 GPD1P21695 349 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 PRPH2P23942 346 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 CHMP24386 653 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ABCD3P28288 659 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 HOXD9P28356 352 aaPredicted RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 MARCKSP29966 332 aaPredicted RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 HNF1BP35680 557 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 GGT5P36269 586 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ARL1P40616 181 aaPredicted RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms