RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PRRX2Q99811 253 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 TRIM51Q9BSJ1 452 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 FICDQ9BVA6 458 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 C1QTNF7Q9BXJ2 289 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 WDR26Q9H7D7 661 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 PCDH12Q9NPG4 1184 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 ZDHHC18Q9NUE0 388 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 PARPBPQ9NWS1 579 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 C2orf42Q9NWW7 574 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 GRHL1Q9NZI5 618 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 BFARQ9NZS9 450 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 NFKBIL1Q9UBC1 381 aaPredicted RBP5.71□□□□□ -1.5
SCAF11-213ENST00000550629 RIMKLBQ9ULI2 386 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 CHKBQ9Y259 395 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 FADS3Q9Y5Q0 445 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 HEATR9A2RTY3 570 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 NPIPB15A6NHN6 443 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 SDR42E2A6NKP2 422 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 C2orf81A6NN90 581 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 E7ESA3 106 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 F5H423 210 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 EIF3HO15372 352 aaKnown RBP eCLIP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 LATO43561 262 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 USP12O75317 370 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 IPO13O94829 963 aaKnown RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 TMEM63AO94886 807 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 SEMA4FO95754 770 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 ADRA1DP25100 572 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 TNFRSF8P28908 595 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 CD6P30203 668 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 HMGCLP35914 325 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 STC1P52823 247 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 METAP1P53582 386 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 ITGA8P53708 1063 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 LGALS4P56470 323 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 ARL4CP56559 192 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 TAS2R38P59533 333 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 DCDC1P59894 354 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 FAM193AP78312 1265 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 CSTF1Q05048 431 aaKnown RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 MSLNQ13421 630 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 GALNT3Q14435 633 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 SPARCL1Q14515 664 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 TAF1AQ15573 450 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 CDKN3Q16667 212 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 PCID2Q5JVF3 399 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 ANKRD22Q5VYY1 191 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 WDR93Q6P2C0 686 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 CENPUQ71F23 418 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 ZNF534Q76KX8 674 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 KDELC2Q7Z4H8 507 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 CAND1Q86VP6 1230 aaKnown RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 NRSN1Q8IZ57 195 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 MAML2Q8IZL2 1156 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 PPHLN1Q8NEY8 458 aaKnown RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 OR52K1Q8NGK4 314 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 CHAC2Q8WUX2 184 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 SERPINB12Q96P63 405 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 TRIM31Q9BZY9 425 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 BTBD1Q9H0C5 482 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 KCNH6Q9H252 994 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 NEUROG2Q9H2A3 272 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 MRM3Q9HC36 420 aaKnown RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 EPB41L5Q9HCM4 733 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 RRAGDQ9NQL2 400 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 GDF3Q9NR23 364 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 ZSCAN32Q9NX65 697 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 WSB2Q9NYS7 404 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 MTRF1LQ9UGC7 380 aaKnown RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 SERGEFQ9UGK8 458 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 APOBEC2Q9Y235 224 aaKnown RBP5.7□□□□□ -1.5
SCAF11-213ENST00000550629 SNX24Q9Y343 169 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 ZNF711Q9Y462 761 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 PCDHGA2Q9Y5H1 932 aa5.7□□□□□ -1.5
SCAF11-213ENST00000550629 IGHV1OR15-9A0A0B4J2B8 117 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 C1orf232A0A0U1RR37 186 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 FAM237BA0A1B0GVD1 139 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 TCRBV7S3A2A0A539 114 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 TOR1BO14657 336 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 LDB2O43679 373 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 NDUFS2O75306 463 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 RPP40O75818 363 aaKnown RBP5.69□□□□□ -1.5
SCAF11-213ENST00000550629 TTC4O95801 387 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 PYGLP06737 847 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 POLBP06746 335 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 GSTA2P09210 222 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 ALPIP09923 528 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 LTA4HP09960 611 aaKnown RBP5.69□□□□□ -1.5
SCAF11-213ENST00000550629 RHOXF2BP0C7M4 288 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 ELFN1P0C7U0 828 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 SP9P0CG40 484 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 TSHRP16473 764 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 CTPS1P17812 591 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 LPOP22079 712 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-213ENST00000550629 LHCGRP22888 699 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 TEAD1P28347 426 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 HADHAP40939 763 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 GRIA1P42261 906 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 DPP6P42658 865 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms