RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	LCN9	Q8WX39	176 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	SEC14L1	Q92503	715 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	DLG3	Q92796	817 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	TMEM159	Q96B96	161 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	TTC1	Q99614	292 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	GPR21	Q99679	349 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	OLFM1	Q99784	485 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	MCMBP	Q9BTE3	642 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	STRADB	Q9C0K7	418 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	ZMYND15	Q9H091	742 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	VPS37B	Q9H9H4	285 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	INTS10	Q9NVR2	710 aa	Known RBP	10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	MOCS1	Q9NZB8	636 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	SEMA5B	Q9P283	1151 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	EPHA6	Q9UF33	1036 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	KLHL20	Q9Y2M5	609 aa		10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	TDRKH	Q9Y2W6	561 aa	Known RBP	10.88	□□□□□ -0.67
RAB5B-208	ENST00000550283	TMEM8B	A6NDV4	472 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	ARHGEF33	A8MVX0	844 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	QSOX1	O00391	747 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	IFRD1	O00458	451 aa	Predicted RBP	10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	HGS	O14964	777 aa	Predicted RBP	10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	EFS	O43281	561 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	C1orf105	O95561	183 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	ITGA2B	P08514	1039 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	GSTM1	P09488	218 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	JMJD7	P0C870	316 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	ST6GAL1	P15907	406 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	ZNF28	P17035	718 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	CHRM3	P20309	590 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	PKLR	P30613	574 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	GUCY2D	Q02846	1103 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	GSTM4	Q03013	218 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	CKAP4	Q07065	602 aa	Known RBP	10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	TRA2A	Q13595	282 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	TUBB2A	Q13885	445 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	KRT33B	Q14525	404 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	KLHL38	Q2WGJ6	581 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	RNF187	Q5TA31	235 aa	Predicted RBP	10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	PRAMEF17	Q5VTA0	474 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	CACHD1	Q5VU97	1274 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	C8orf74	Q6P047	294 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	TMEM207	Q6UWW9	146 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	TIPARP	Q7Z3E1	657 aa	Known RBP	10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	PIWIL4	Q7Z3Z4	852 aa	Known RBP	10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	PRSS42	Q7Z5A4	293 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	TAX1BP1	Q86VP1	789 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	PLXDC1	Q8IUK5	500 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	CPNE9	Q8IYJ1	553 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	ZBTB2	Q8N680	514 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	AVL9	Q8NBF6	648 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	AGBL5	Q8NDL9	886 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	OR5K2	Q8NHB8	316 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	KLHL6	Q8WZ60	621 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	ANKRD7	Q92527	254 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	FGF11	Q92914	225 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	GRAMD1A	Q96CP6	724 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	ELMO2	Q96JJ3	720 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	OR2A14	Q96R47	310 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	CMKLR1	Q99788	373 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	FAM167B	Q9BTA0	163 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	TUBB2B	Q9BVA1	445 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	SPRY4	Q9C004	299 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	RAB33B	Q9H082	229 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	ZNF768	Q9H5H4	540 aa	Known RBP	10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	TFB2M	Q9H5Q4	396 aa	Known RBP	10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	MVB12B	Q9H7P6	319 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	LATS2	Q9NRM7	1088 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	POMT2	Q9UKY4	750 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	ACACA	Q13085	2346 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	SDK2	Q58EX2	2172 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	LOC400499	M0QZD8	3231 aa		10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283	FLNB	O75369	2602 aa	Known RBP	10.87	□□□□□ -0.67
RAB5B-208	ENST00000550283		A0A087WV48	116 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	SLC9B1P1	A6NJY1	282 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	RASSF9	O75901	435 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	FAM155B	O75949	473 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	MATN4	O95460	622 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	TTC4	O95801	387 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	TSPAN12	O95859	305 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	APOA4	P06727	396 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	CHRM5	P08912	532 aa	Predicted RBP	10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	ANKRD34C	P0C6C1	535 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	EBLN1	P0CF75	366 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	MCM3	P25205	808 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	PSMB5	P28074	263 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	PRDX3	P30048	256 aa	Known RBP	10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	CSTF2	P33240	577 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	PPARG	P37231	505 aa	Predicted RBP	10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	MC2R	Q01718	297 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	CLN3	Q13286	438 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	FASTK	Q14296	549 aa	Known RBP	10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	ZNF460	Q14592	562 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	KYNU	Q16719	465 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	PLEKHS1	Q5SXH7	462 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	OTOA	Q7RTW8	1153 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	AMIGO1	Q86WK6	493 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	CCDC25	Q86WR0	208 aa		10.86	□□□□□ -0.67
RAB5B-208	ENST00000550283	SPACA3	Q8IXA5	215 aa		10.86	□□□□□ -0.67

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