RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-222ENST00000550155 S1PR5Q9H228 398 aa3.93□□□□□ -1.78
CNOT2-222ENST00000550155 ARRDC1-AS1Q9H2J1 176 aa3.93□□□□□ -1.78
CNOT2-222ENST00000550155 KCNK15Q9H427 330 aa3.93□□□□□ -1.78
CNOT2-222ENST00000550155 FGF21Q9NSA1 209 aa3.93□□□□□ -1.78
CNOT2-222ENST00000550155 TAB2Q9NYJ8 693 aa3.93□□□□□ -1.78
CNOT2-222ENST00000550155 EPHA6Q9UF33 1036 aa3.93□□□□□ -1.78
CNOT2-222ENST00000550155 MSGN1A6NI15 193 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 PTGES3LE9PB15 166 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 XRCC3O43542 346 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 PRAMEF11O60813 436 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 DFFBO76075 338 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 GJA1P17302 382 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 TLX1P31314 330 aaPredicted RBP3.92□□□□□ -1.78
CNOT2-222ENST00000550155 HNF4AP41235 474 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 SUOXP51687 545 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 SIRPAP78324 504 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 GRAPQ13588 217 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 RAPSNQ13702 412 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 ENPP2Q13822 863 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 NECTIN1Q15223 517 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 TAF1BQ53T94 588 aaPredicted RBP3.92□□□□□ -1.78
CNOT2-222ENST00000550155 C2CD6Q53TS8 623 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 SUSD1Q6UWL2 747 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 HAUS6Q7Z4H7 955 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 PTAR1Q7Z6K3 402 aaPredicted RBP3.92□□□□□ -1.78
CNOT2-222ENST00000550155 TRIML1Q8N9V2 468 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 OLIG1Q8TAK6 271 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 CCDC107Q8WV48 283 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 IRGQQ8WZA9 623 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 NEK1Q96PY6 1258 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 GPATCH1Q9BRR8 931 aaKnown RBP3.92□□□□□ -1.78
CNOT2-222ENST00000550155 BTBD10Q9BSF8 475 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 SPATC1LQ9H0A9 340 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 ATP13A3Q9H7F0 1226 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 PPANQ9NQ55 473 aaKnown RBP3.92□□□□□ -1.78
CNOT2-222ENST00000550155 CCDC177Q9NQR7 707 aaPredicted RBP3.92□□□□□ -1.78
CNOT2-222ENST00000550155 ARHGEF38Q9NXL2 777 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 CACNG4Q9UBN1 327 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 PPP1R3CQ9UQK1 317 aa3.92□□□□□ -1.78
CNOT2-222ENST00000550155 LNP1A1A4G5 178 aa3.91□□□□□ -1.78
CNOT2-222ENST00000550155 B4DLN1 442 aa3.91□□□□□ -1.78
CNOT2-222ENST00000550155 USO1O60763 962 aaKnown RBP3.91□□□□□ -1.78
CNOT2-222ENST00000550155 MRPL12P52815 198 aaKnown RBP3.91□□□□□ -1.78
CNOT2-222ENST00000550155 CDK3Q00526 305 aa3.91□□□□□ -1.78
CNOT2-222ENST00000550155 ELAVL2Q12926 359 aaKnown RBP3.91□□□□□ -1.78
CNOT2-222ENST00000550155 CDK20Q8IZL9 346 aa3.91□□□□□ -1.78
CNOT2-222ENST00000550155 DCLK2Q8N568 766 aa3.91□□□□□ -1.78
CNOT2-222ENST00000550155 OR5M8Q8NGP6 311 aa3.91□□□□□ -1.78
CNOT2-222ENST00000550155 OR13J1Q8NGT2 312 aa3.91□□□□□ -1.78
CNOT2-222ENST00000550155 OR2AJ1Q8NGZ0 328 aa3.91□□□□□ -1.78
CNOT2-222ENST00000550155 PHLDA1Q8WV24 401 aaPredicted RBP3.91□□□□□ -1.78
CNOT2-222ENST00000550155 NSMCE3Q96MG7 304 aa3.91□□□□□ -1.78
CNOT2-222ENST00000550155 FNBP1Q96RU3 617 aa3.91□□□□□ -1.78
CNOT2-222ENST00000550155 URM1Q9BTM9 101 aaKnown RBP3.91□□□□□ -1.78
CNOT2-222ENST00000550155 LRRC61Q9BV99 259 aa3.91□□□□□ -1.78
CNOT2-222ENST00000550155 MAK16Q9BXY0 300 aaKnown RBP3.91□□□□□ -1.78
CNOT2-222ENST00000550155 MIS12Q9H081 205 aa3.91□□□□□ -1.78
CNOT2-222ENST00000550155 SPHK1Q9NYA1 384 aa3.91□□□□□ -1.78
CNOT2-222ENST00000550155 ZHX1Q9UKY1 873 aaPredicted RBP3.91□□□□□ -1.78
CNOT2-222ENST00000550155 ZNF148Q9UQR1 794 aa3.91□□□□□ -1.78
CNOT2-222ENST00000550155 AP3D1O14617 1153 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 CLDN1O95832 211 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 TM4SF1P30408 202 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 SLC9A3P48764 834 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 PAX9P55771 341 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 CCDC30Q5VVM6 783 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 FIGLAQ6QHK4 219 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 PAQR6Q6TCH4 344 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 LDB1Q86U70 411 aaPredicted RBP3.9□□□□□ -1.79
CNOT2-222ENST00000550155 TMEM139Q8IV31 216 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 KIRREL3Q8IZU9 778 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 WWTR1Q9GZV5 400 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 PPIL3Q9H2H8 161 aaKnown RBP3.9□□□□□ -1.79
CNOT2-222ENST00000550155 DPAGT1Q9H3H5 408 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 OSGEPL1Q9H4B0 414 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 OR6C2Q9NZP2 312 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 STK26Q9P289 416 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 SEC63Q9UGP8 760 aaKnown RBP3.9□□□□□ -1.79
CNOT2-222ENST00000550155 KLK13Q9UKR3 277 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 MTUS1Q9ULD2 1270 aa3.9□□□□□ -1.79
CNOT2-222ENST00000550155 LAS1LQ9Y4W2 734 aaKnown RBP3.9□□□□□ -1.79
CNOT2-222ENST00000550155 ARID4BQ4LE39 1312 aaPredicted RBP3.9□□□□□ -1.79
CNOT2-222ENST00000550155 ZNF195O14628 629 aa3.89□□□□□ -1.79
CNOT2-222ENST00000550155 CREB3O43889 395 aa3.89□□□□□ -1.79
CNOT2-222ENST00000550155 MAGEC1O60732 1142 aa3.89□□□□□ -1.79
CNOT2-222ENST00000550155 MED24O75448 989 aa3.89□□□□□ -1.79
CNOT2-222ENST00000550155 ZWINTO95229 277 aa3.89□□□□□ -1.79
CNOT2-222ENST00000550155 IGHV4-31P0DP07 118 aa3.89□□□□□ -1.79
CNOT2-222ENST00000550155 GABRA5P31644 462 aa3.89□□□□□ -1.79
CNOT2-222ENST00000550155 MMP12P39900 470 aa3.89□□□□□ -1.79
CNOT2-222ENST00000550155 GARSP41250 739 aaKnown RBP3.89□□□□□ -1.79
CNOT2-222ENST00000550155 RPL21P46778 160 aaKnown RBP3.89□□□□□ -1.79
CNOT2-222ENST00000550155 TPD52P55327 224 aaPredicted RBP3.89□□□□□ -1.79
CNOT2-222ENST00000550155 CXCL9Q07325 125 aa3.89□□□□□ -1.79
CNOT2-222ENST00000550155 DDX10Q13206 875 aaKnown RBP3.89□□□□□ -1.79
CNOT2-222ENST00000550155 RIGQ13278 110 aa3.89□□□□□ -1.79
CNOT2-222ENST00000550155 KLHL26Q53HC5 615 aa3.89□□□□□ -1.79
CNOT2-222ENST00000550155 LYSMD4Q5XG99 296 aa3.89□□□□□ -1.79
CNOT2-222ENST00000550155 DHRS7BQ6IAN0 325 aaPredicted RBP3.89□□□□□ -1.79
CNOT2-222ENST00000550155 IL27RAQ6UWB1 636 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms