RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 LMNTD1Q8N9Z9 388 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ATAD1Q8NBU5 361 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ZBTB34Q8NCN2 500 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 OR4L1Q8NH43 312 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 TMA16Q96EY4 203 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 CNDP2Q96KP4 475 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ZSWIM3Q96MP5 696 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 IQCGQ9H095 443 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ABCG8Q9H221 673 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 POMKQ9H5K3 350 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ARHGEF3Q9NR81 526 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 CD300AQ9UGN4 299 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 PCTPQ9UKL6 214 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ZFR2Q9UPR6 939 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 RAI2Q9Y5P3 530 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 U3KQA8 63 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 LOC102723996A0A087X1L8 192 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 UQCRHLA0A096LP55 91 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 PLOD2O00469 737 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 KDM1AO60341 852 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 TP53P04637 393 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 UQCRHP07919 91 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 KRT19P08727 400 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 KRT16P08779 473 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 CD58P19256 250 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 GABRR2P28476 465 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 CD70P32970 193 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ELK3P41970 407 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 GPS2Q13227 327 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 PTPRRQ15256 657 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 SF1Q15637 639 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 FSCBQ5H9T9 825 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 CFAP157Q5JU67 520 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF385CQ66K41 422 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 TMEM207Q6UWW9 146 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 CD300LDQ6UXZ3 194 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 HORMAD1Q86X24 394 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 NRROSQ86YC3 692 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 LGI2Q8N0V4 545 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 OR5K2Q8NHB8 316 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 WDR36Q8NI36 951 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 APOBEC4Q8WW27 367 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 GAB3Q8WWW8 586 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 C16orf45Q96MC5 204 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 SLC22A12Q96S37 553 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 SLC39A3Q9BRY0 314 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF717Q9BY31 904 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 TRIM4Q9C037 500 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 WDR12Q9GZL7 423 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ROGDIQ9GZN7 287 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ANKRD19PQ9H560 264 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 NOD2Q9HC29 1040 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 SDR39U1Q9NRG7 319 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 FAM49BQ9NUQ9 324 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 KLHL3Q9UH77 587 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ACAD8Q9UKU7 415 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 DNAJC16Q9Y2G8 782 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 A0A087WV62 115 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 MACROD2A1Z1Q3 448 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 ANKRD34BA5PLL1 514 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 PRAMEF26H0Y7S4 382 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 TRIM24O15164 1050 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 SNX3O60493 162 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 TULP3O75386 442 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 CD37P11049 281 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 HDCP19113 662 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 CD27P26842 260 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 CTSKP43235 329 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 KCNQ1P51787 676 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 DLG1Q12959 904 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 KIR2DS3Q14952 304 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 ERCC6LQ2NKX8 1250 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 PYCR3Q53H96 274 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 WIPI1Q5MNZ9 446 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 MZT2BQ6NZ67 158 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 KCNMB4Q86W47 210 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 EMC1Q8N766 993 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 NAXEQ8NCW5 288 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 OR8J3Q8NGG0 315 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 GIMAP7Q8NHV1 300 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 ADAMTS16Q8TE57 1224 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 RSAD2Q8WXG1 361 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF75CPQ92670 426 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 BTBD6Q96KE9 485 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 RDH12Q96NR8 316 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 TMEM79Q9BSE2 394 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 HAUS8Q9BT25 410 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 CINPQ9BW66 212 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 MRPL46Q9H2W6 279 aaKnown RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 MYNNQ9NPC7 610 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 SCUBE2Q9NQ36 999 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 CFAP97Q9P2B7 532 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 KANSL1LA0AUZ9 987 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 OR2A25A4D2G3 310 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 PRR33A8MZF0 331 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 B4E171 279 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 KCNN4O15554 427 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 EEDO75530 441 aaKnown RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 LYPLA1O75608 230 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms