RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 SYVN1Q86TM6 617 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 GPR135Q8IZ08 494 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 SLC22A15Q8IZD6 547 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 OR5AR1Q8NGP9 310 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 C9orf43Q8TAL5 461 aaPredicted RBP11.03□□□□□ -0.64
BEST3-209ENST00000548658 CT55Q8WUE5 264 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 THAP4Q8WY91 577 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 MR1Q95460 341 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 SLC22A18Q96BI1 424 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 CLIP3Q96DZ5 547 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 TCTN2Q96GX1 697 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 TRAPPC9Q96Q05 1148 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 TCF12Q99081 682 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 KIFC1Q9BW19 673 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 AP1M1Q9BXS5 423 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 SLC7A5P2Q9GIP4 190 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 TREX1Q9NSU2 369 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 GNPTGQ9UJJ9 305 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 TDRKHQ9Y2W6 561 aaKnown RBP11.03□□□□□ -0.64
BEST3-209ENST00000548658 AP1M2Q9Y6Q5 423 aa11.03□□□□□ -0.64
BEST3-209ENST00000548658 TMEM150CB9EJG8 249 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 E7EQ34 232 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 H3BMM5 538 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 MEN1O00255 615 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 ZSCAN12O43309 604 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 SUV39H1O43463 412 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 GPC4O75487 556 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 SLCO2B1O94956 709 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 CHRM5P08912 532 aaPredicted RBP11.02□□□□□ -0.65
BEST3-209ENST00000548658 CD63P08962 238 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 ST6GAL1P15907 406 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 PAMP19021 973 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 CYP2A7P20853 494 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 AGXTP21549 392 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 RPS3P23396 243 aaKnown RBP eCLIP11.02□□□□□ -0.65
BEST3-209ENST00000548658 AOAHP28039 575 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 CCR7P32248 378 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 RAB28P51157 221 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 RNF187Q5TA31 235 aaPredicted RBP11.02□□□□□ -0.65
BEST3-209ENST00000548658 LCE2DQ5TA82 110 aaPredicted RBP11.02□□□□□ -0.65
BEST3-209ENST00000548658 UNC5DQ6UXZ4 953 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 RASGEF1CQ8N431 466 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 RAB42Q8N4Z0 105 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 PRELID2Q8N945 189 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 MAGOHBQ96A72 148 aaKnown RBP11.02□□□□□ -0.65
BEST3-209ENST00000548658 PPM1MQ96MI6 270 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 C17orf62Q9BQA9 187 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 TWSG1Q9GZX9 223 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 ACTL8Q9H568 366 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 XKR8Q9H6D3 395 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 ACTR5Q9H9F9 607 aaPredicted RBP11.02□□□□□ -0.65
BEST3-209ENST00000548658 TTC7AQ9ULT0 858 aaPredicted RBP11.02□□□□□ -0.65
BEST3-209ENST00000548658 ICKQ9UPZ9 632 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 FARSAQ9Y285 508 aaKnown RBP11.02□□□□□ -0.65
BEST3-209ENST00000548658 VPS9D1Q9Y2B5 631 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 MRPS18BQ9Y676 258 aaKnown RBP11.02□□□□□ -0.65
BEST3-209ENST00000548658 KCNMB2Q9Y691 235 aa11.02□□□□□ -0.65
BEST3-209ENST00000548658 CDC14CA4D256 554 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 MKRN2OSH3BPM6 223 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 RAB40ALP0C0E4 278 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 MLNP12872 115 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 UGT2B7P16662 529 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 MAGEA6P43360 314 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 ADARP55265 1226 aaKnown RBP11.01□□□□□ -0.65
BEST3-209ENST00000548658 ITGA1P56199 1179 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 CRADDP78560 199 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 FOXK1P85037 733 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 GPS1Q13098 491 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 UGT8Q16880 541 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 SLC5A12Q1EHB4 618 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 FBXO38Q6PIJ6 1188 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 OTOAQ7RTW8 1153 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 APLFQ8IW19 511 aaPredicted RBP11.01□□□□□ -0.65
BEST3-209ENST00000548658 DCUN1D3Q8IWE4 304 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 DSELQ8IZU8 1212 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 OTUD6BQ8N6M0 293 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 MAGEC3Q8TD91 643 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 DENND1AQ8TEH3 1009 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 RAD51AP1Q96B01 352 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 ABHD17AQ96GS6 310 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 FOPNLQ96NB1 174 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 OR2A14Q96R47 310 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 RAB11FIP5Q9BXF6 653 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 NLNQ9BYT8 704 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 P2RY12Q9H244 342 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 XAB2Q9HCS7 855 aaKnown RBP11.01□□□□□ -0.65
BEST3-209ENST00000548658 SAMD15Q9P1V8 674 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 ANAPC2Q9UJX6 822 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 SOX13Q9UN79 622 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 ZNF462Q96JM2 2506 aa11.01□□□□□ -0.65
BEST3-209ENST00000548658 A0A0J9YY10 115 aa11□□□□□ -0.65
BEST3-209ENST00000548658 GOLGA6L10A0A0M3HER8 536 aa11□□□□□ -0.65
BEST3-209ENST00000548658 SDR42E2A6NKP2 422 aa11□□□□□ -0.65
BEST3-209ENST00000548658 ISM1B1AKI9 464 aa11□□□□□ -0.65
BEST3-209ENST00000548658 OR2B3O76000 313 aa11□□□□□ -0.65
BEST3-209ENST00000548658 VAPBO95292 243 aa11□□□□□ -0.65
BEST3-209ENST00000548658 FKBP9O95302 570 aa11□□□□□ -0.65
BEST3-209ENST00000548658 S1PR4O95977 384 aa11□□□□□ -0.65
BEST3-209ENST00000548658 KRT14P02533 472 aa11□□□□□ -0.65
BEST3-209ENST00000548658 ESR1P03372 595 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms