RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 PHF10Q8WUB8 498 aaKnown RBP9.68□□□□□ -0.86
SMARCD1-205ENST00000548573 NCLNQ969V3 563 aa9.68□□□□□ -0.86
SMARCD1-205ENST00000548573 EXOC2Q96KP1 924 aa9.68□□□□□ -0.86
SMARCD1-205ENST00000548573 SMIM14Q96QK8 99 aa9.68□□□□□ -0.86
SMARCD1-205ENST00000548573 OR52E6Q96RD3 313 aa9.68□□□□□ -0.86
SMARCD1-205ENST00000548573 KCNH6Q9H252 994 aa9.68□□□□□ -0.86
SMARCD1-205ENST00000548573 ATP13A3Q9H7F0 1226 aa9.68□□□□□ -0.86
SMARCD1-205ENST00000548573 C1orf109Q9NX04 203 aa9.68□□□□□ -0.86
SMARCD1-205ENST00000548573 CPA4Q9UI42 421 aa9.68□□□□□ -0.86
SMARCD1-205ENST00000548573 ZMYM5Q9UJ78 669 aa9.68□□□□□ -0.86
SMARCD1-205ENST00000548573 AGO1Q9UL18 857 aaKnown RBP9.68□□□□□ -0.86
SMARCD1-205ENST00000548573 OARD1Q9Y530 152 aa9.68□□□□□ -0.86
SMARCD1-205ENST00000548573 IQCF5A8MTL0 148 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 TAPBPO15533 448 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 AQP9O43315 295 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 XPNPEP2O43895 674 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ACSL4O60488 711 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 B4GALT3O60512 393 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ARHGEF15O94989 841 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 FTH1P02794 183 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ZDHHC11BP0C7U3 371 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 PFKLP17858 780 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 IGFBP5P24593 272 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 CD6P30203 668 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 SLC6A4P31645 630 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 HSPA7P48741 367 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 DSC1Q08554 894 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 HIST2H2ACQ16777 129 aaPredicted RBP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 USP39Q53GS9 565 aaKnown RBP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 CPZQ66K79 652 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 CAPN13Q6MZZ7 669 aaPredicted RBP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 CERS6Q6ZMG9 384 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 GCNT7Q6ZNI0 430 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 DET1Q7L5Y6 550 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 TAS2R42Q7RTR8 314 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 P2RY8Q86VZ1 359 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ATAD1Q8NBU5 361 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 CNIH3Q8TBE1 160 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 DYNC2LI1Q8TCX1 351 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 NETO1Q8TDF5 533 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 GPR152Q8TDT2 470 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 FAM120BQ96EK7 910 aaKnown RBP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ZNF300Q96RE9 604 aaPredicted RBP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 CPPED1Q9BRF8 314 aaPredicted RBP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 SPON2Q9BUD6 331 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 NSUN3Q9H649 340 aaKnown RBP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ZNF408Q9H9D4 720 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 LRTM1Q9HBL6 345 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 BPIFA1Q9NP55 256 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 SCN3BQ9NY72 215 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 TRPS1Q9UHF7 1281 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 MAN2B2Q9Y2E5 1009 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 PCDHGC4Q9Y5F7 938 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 PCDHGA10Q9Y5H3 936 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ZFP37Q9Y6Q3 630 aaPredicted RBP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ANKRD12Q6UB98 2062 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 A0A096LPI6 279 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 H3BNC9 293 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 TOR1BO14657 336 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 WNT9AO14904 365 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 SYN3O14994 580 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 AXIN1O15169 862 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ULK1O75385 1050 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 NADKO95544 446 aaPredicted RBP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 EBLN1P0CF75 366 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 RPS3P23396 243 aaKnown RBP eCLIP9.67□□□□□ -0.863e-6■■■□□ 16.9
SMARCD1-205ENST00000548573 RGS4P49798 205 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 IFITM3Q01628 133 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ABHD18Q0P651 414 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 PPP1R8Q12972 351 aaKnown RBP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 NPTX1Q15818 432 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 INAQ16352 499 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 VARS2Q5ST30 1063 aaKnown RBP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 PERM1Q5SV97 790 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 PLEKHG7Q6ZR37 379 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 PRSS48Q7RTY5 328 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 B3GNT8Q7Z7M8 397 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ZNF280BQ86YH2 543 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 PHACTR4Q8IZ21 702 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ABI1Q8IZP0 508 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 CADM3Q8N126 398 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 SVOPQ8N4V2 548 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 TTC9BQ8N6N2 239 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 EFHBQ8N7U6 833 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 NDNFQ8TB73 568 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 GLMNQ92990 594 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 USP7Q93009 1102 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 SPATA17Q96L03 361 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 NTMT1Q9BV86 223 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 FAM126AQ9BYI3 521 aaPredicted RBP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 CD244Q9BZW8 370 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 NACA2Q9H009 215 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ANKHQ9HCJ1 492 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 CCNB1IP1Q9NPC3 277 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ELOVL2Q9NXB9 296 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 ERVK-18Q9QC07 812 aa9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 DNMT3BQ9UBC3 853 aaKnown RBP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 SAMD4AQ9UPU9 718 aaKnown RBP9.67□□□□□ -0.86
SMARCD1-205ENST00000548573 FAM32AQ9Y421 112 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms