RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SLC41A2Q96JW4 573 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 PPM1MQ96MI6 270 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 CCDC68Q9H2F9 335 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 GRHL1Q9NZI5 618 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 POMT2Q9UKY4 750 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 PLAGL1Q9UM63 463 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 MED16Q9Y2X0 877 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 MATN2O00339 956 aa18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 POLR1CO15160 346 aaPredicted RBP18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 RPN2P04844 631 aa18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 PRDX3P30048 256 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 SHMT2P34897 504 aa18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 CARSP49589 748 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 CLCN7P51798 805 aa18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 FOXM1Q08050 763 aa18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 TGIF1Q15583 401 aa18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 COL28A1Q2UY09 1125 aa18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 TRMT10BQ6PF06 316 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 FBXO38Q6PIJ6 1188 aa18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 CEACAM20Q6UY09 585 aa18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 CNTN4Q8IWV2 1026 aa18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 FBXO36Q8NEA4 188 aa18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 GABPB2Q8TAK5 448 aaPredicted RBP18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 TEFMQ96QE5 360 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 SLC30A3Q99726 388 aa18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 RAB17Q9H0T7 212 aa18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 PPANQ9NQ55 473 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 RUVBL2Q9Y230 463 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 NFS1Q9Y697 457 aa18.16■□□□□ 0.5
PRPF40B-206ENST00000547764 C2orf74A8MZ97 194 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 KIF2AO00139 706 aaPredicted RBP18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 KDM1AO60341 852 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 LIPCP11150 499 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 GABRB3P28472 473 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 ATP5DP30049 168 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 GRB7Q14451 532 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 KCNAB1Q14722 419 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 TRADDQ15628 312 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 ACSBG2Q5FVE4 666 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 TEDDM1Q5T9Z0 273 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 DTX1Q86Y01 620 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 KMT5CQ86Y97 462 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 SPNS2Q8IVW8 549 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 DCUN1D3Q8IWE4 304 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 CARFQ8N187 725 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 SIDT2Q8NBJ9 832 aaKnown RBP18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 KCNJ9Q92806 393 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 OR6C1Q96RD1 312 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 ZPBPQ9BS86 351 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 AARSD1Q9BTE6 412 aaKnown RBP18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 ACTR10Q9NZ32 417 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 OR6C2Q9NZP2 312 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 SLC17A6Q9P2U8 582 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 CIDEBQ9UHD4 219 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 TSR3Q9UJK0 312 aaKnown RBP18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 SSUH2Q9Y2M2 353 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 PCDHB11Q9Y5F2 797 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 COMMD10Q9Y6G5 202 aa18.15■□□□□ 0.5
PRPF40B-206ENST00000547764 SDK2Q58EX2 2172 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 PIPSLA2A3N6 862 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 STMND1H3BQB6 276 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 ZBTB11O95625 1053 aaPredicted RBP18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 AHSGP02765 367 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 CHRM5P08912 532 aaPredicted RBP18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 FOLR1P15328 257 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 CDH3P22223 829 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 ARL4DP49703 201 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 HSD11B2P80365 405 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 FRG1Q14331 258 aaKnown RBP18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 IL11RAQ14626 422 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 KYNUQ16719 465 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 KIAA0408Q6ZU52 694 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 ZBED8Q8IZ13 594 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 D2HGDHQ8N465 521 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 GIMAP7Q8NHV1 300 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 CRELD1Q96HD1 420 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 FOPNLQ96NB1 174 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 GPR21Q99679 349 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 LRRC1Q9BTT6 524 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 MENTQ9BUN1 341 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 C1GALT1Q9NS00 363 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 SPHK1Q9NYA1 384 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 KLHL42Q9P2K6 505 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 MRFAP1Q9Y605 127 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 CFAP47Q6ZTR5 3102 aa18.14■□□□□ 0.49
PRPF40B-206ENST00000547764 ADAMTS20P59510 1910 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 SLC9B1P1A6NJY1 282 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 MATN4O95460 622 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 C1orf105O95561 183 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 EBLN1P0CF75 366 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 PKLRP30613 574 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 BDKRB1P46663 353 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 RAB28P51157 221 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 PLTPP55058 493 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 SLC7A5Q01650 507 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 KLHL38Q2WGJ6 581 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 BROXQ5VW32 411 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 C8orf74Q6P047 294 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 TTC23LQ6PF05 361 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms