RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 PRR11Q96HE9 360 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-215ENST00000547672 SHDQ96IW2 340 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 METTL2AQ96IZ6 378 aaKnown RBP13.12□□□□□ -0.31
PTCH1-215ENST00000547672 NELL2Q99435 816 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 CADM1Q9BY67 442 aaKnown RBP13.12□□□□□ -0.31
PTCH1-215ENST00000547672 EIF3LQ9Y262 564 aaKnown RBP13.12□□□□□ -0.31
PTCH1-215ENST00000547672 NDUFAF1Q9Y375 327 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 BPTFQ12830 3046 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 SERTM1A2A2V5 107 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 K7ESM1 405 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 LILRB5O75023 590 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 ADAM23O75077 832 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 PAK4O96013 591 aaPredicted RBP13.11□□□□□ -0.31
PTCH1-215ENST00000547672 PBLDP30039 288 aaPredicted RBP13.11□□□□□ -0.31
PTCH1-215ENST00000547672 OXTRP30559 389 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 HNF4AP41235 474 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 SLC6A12P48065 614 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 DGKEP52429 567 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 EMX2Q04743 252 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 PRKCQQ04759 706 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 CUL3Q13618 768 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 INPP5AQ14642 412 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 ARHGAP19Q14CB8 494 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 IMPG1Q17R60 797 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 PTCHD3Q3KNS1 767 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 LEXMQ3ZCV2 418 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 AGKQ53H12 422 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 XKR7Q5GH72 579 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 COQ5Q5HYK3 327 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 ZNF648Q5T619 568 aaPredicted RBP13.11□□□□□ -0.31
PTCH1-215ENST00000547672 CAPN13Q6MZZ7 669 aaPredicted RBP13.11□□□□□ -0.31
PTCH1-215ENST00000547672 KIAA1211LQ6NV74 962 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 GPR153Q6NV75 609 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 IL27RAQ6UWB1 636 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 TRIM46Q7Z4K8 759 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 NET1Q7Z628 596 aaPredicted RBP13.11□□□□□ -0.31
PTCH1-215ENST00000547672 TRIM69Q86WT6 500 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 SNX32Q86XE0 403 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 VRK3Q8IV63 474 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 OXR1Q8N573 874 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 L3MBTL4Q8NA19 623 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 OR2T34Q8NGX1 318 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 EZH1Q92800 747 aaPredicted RBP13.11□□□□□ -0.31
PTCH1-215ENST00000547672 RAD51AP1Q96B01 352 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 REPS1Q96D71 796 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 MIPEPQ99797 713 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 TMEM79Q9BSE2 394 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 TIMM29Q9BSF4 260 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 MKRN2Q9H000 416 aaKnown RBP13.11□□□□□ -0.31
PTCH1-215ENST00000547672 TNFRSF12AQ9NP84 129 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 GID8Q9NWU2 228 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 NMRK1Q9NWW6 199 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 G3BP2Q9UN86 482 aaKnown RBP13.11□□□□□ -0.31
PTCH1-215ENST00000547672 TIMM22Q9Y584 194 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 KCNE2Q9Y6J6 123 aa13.11□□□□□ -0.31
PTCH1-215ENST00000547672 LOC730098B7Z3J9 87 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 PPP6CO00743 305 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 FPGTO14772 594 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 PI15O43692 258 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 C1orf105O95561 183 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 NPPAP01160 153 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 JUNP05412 331 aaKnown RBP13.1□□□□□ -0.31
PTCH1-215ENST00000547672 PRR35P0CG20 571 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 GNAZP19086 355 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 MAPK1P28482 360 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 ADPRHP54922 357 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 DMPKQ09013 629 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 TRAF3Q13114 568 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 LAPTM5Q13571 262 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 TRMT5Q32P41 509 aaKnown RBP13.1□□□□□ -0.31
PTCH1-215ENST00000547672 SPATS1Q496A3 300 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 ZNF658BQ4V348 819 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-215ENST00000547672 PDCD4Q53EL6 469 aaKnown RBP13.1□□□□□ -0.31
PTCH1-215ENST00000547672 CACHD1Q5VU97 1274 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 METRNLQ641Q3 311 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 LETMD1Q6P1Q0 360 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 PRMT9Q6P2P2 845 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 AGTRAPQ6RW13 159 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 HACD2Q6Y1H2 254 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 PDZD3Q86UT5 571 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 TP53I13Q8NBR0 393 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-215ENST00000547672 OR52B6Q8NGF0 335 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 OR9A1PQ8NGU1 263 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 FAM174AQ8TBP5 190 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 STMN2Q93045 179 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 ESAMQ96AP7 390 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 ROPN1LQ96C74 230 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 ZBTB18Q99592 522 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 THTPAQ9BU02 230 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 BTBD1Q9H0C5 482 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 PCBD2Q9H0N5 130 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 ELOVL6Q9H5J4 265 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 SDR39U1Q9NRG7 319 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-215ENST00000547672 NOP53Q9NZM5 478 aaKnown RBP13.1□□□□□ -0.31
PTCH1-215ENST00000547672 ZIM2Q9NZV7 527 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 ZNHIT2Q9UHR6 403 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 MAPRE3Q9UPY8 281 aa13.1□□□□□ -0.31
PTCH1-215ENST00000547672 ATP6AP2A0A1C7CYW4 349 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 ARHGEF33A8MVX0 844 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 MANBAO00462 879 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms