RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 NAT9Q9BTE0 207 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 TUBB2BQ9BVA1 445 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 XKR8Q9H6D3 395 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 FANCEQ9HB96 536 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 SYTL2Q9HCH5 934 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 FGF21Q9NSA1 209 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 SOHLH2Q9NX45 425 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 OR6C2Q9NZP2 312 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 TDRKHQ9Y2W6 561 aaKnown RBP15.41■□□□□ 0.06
DDX54-204ENST00000546898 PCDHGA4Q9Y5G9 962 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 PIPSLA2A3N6 862 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 FANCGO15287 622 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 MAP3K7O43318 606 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 SPAG6O75602 509 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 MT-ND3P03897 115 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 MSL3P1P0C860 447 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 PKMP14618 531 aaKnown RBP15.4■□□□□ 0.06
DDX54-204ENST00000546898 FOLR1P15328 257 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 PGAM1P18669 254 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 IVDP26440 423 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 ATP5DP30049 168 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 FMO4P31512 558 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 RAB28P51157 221 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 SRSF6Q13247 344 aaKnown RBP15.4■□□□□ 0.06
DDX54-204ENST00000546898 SOWAHCQ53LP3 525 aaPredicted RBP15.4■□□□□ 0.06
DDX54-204ENST00000546898 SPESP1Q6UW49 350 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 TIPARPQ7Z3E1 657 aaKnown RBP15.4■□□□□ 0.06
DDX54-204ENST00000546898 AGGF1Q8N302 714 aaeCLIP15.4■□□□□ 0.06
DDX54-204ENST00000546898 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.4■□□□□ 0.06
DDX54-204ENST00000546898 GABPB2Q8TAK5 448 aaPredicted RBP15.4■□□□□ 0.06
DDX54-204ENST00000546898 WBP1Q96G27 269 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 FAM167BQ9BTA0 163 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 TWSG1Q9GZX9 223 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 LATS2Q9NRM7 1088 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 ACTR10Q9NZ32 417 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 FAM169AQ9Y6X4 670 aa15.4■□□□□ 0.06
DDX54-204ENST00000546898 SLC9B1P1A6NJY1 282 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 TK2O00142 265 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 NDC80O14777 642 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 NIPSNAP2O75323 286 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 KIAA0754O94854 1291 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 TTC4O95801 387 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 CHRM5P08912 532 aaPredicted RBP15.39■□□□□ 0.05
DDX54-204ENST00000546898 SPTBP11277 2137 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 LIFP15018 202 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 ZNF28P17035 718 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 PKLRP30613 574 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 STAT5AP42229 794 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 DHX9Q08211 1270 aaKnown RBP15.39■□□□□ 0.05
DDX54-204ENST00000546898 GBX1Q14549 363 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 KCNAB1Q14722 419 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 KYNUQ16719 465 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 C6orf15Q6UXA7 325 aaPredicted RBP15.39■□□□□ 0.05
DDX54-204ENST00000546898 UNC5AQ6ZN44 842 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 ZNF501Q96CX3 271 aaPredicted RBP15.39■□□□□ 0.05
DDX54-204ENST00000546898 PPM1MQ96MI6 270 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 FOPNLQ96NB1 174 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 BBC3Q96PG8 261 aaPredicted RBP15.39■□□□□ 0.05
DDX54-204ENST00000546898 EBNA1BP2Q99848 306 aaKnown RBP15.39■□□□□ 0.05
DDX54-204ENST00000546898 RAB11FIP5Q9BXF6 653 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 GPN2Q9H9Y4 310 aaPredicted RBP15.39■□□□□ 0.05
DDX54-204ENST00000546898 C20orf96Q9NUD7 363 aaPredicted RBP15.39■□□□□ 0.05
DDX54-204ENST00000546898 IL1RAPL1Q9NZN1 696 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 LNPEPQ9UIQ6 1025 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 CRYL1Q9Y2S2 319 aa15.39■□□□□ 0.05
DDX54-204ENST00000546898 FASNP49327 2511 aaKnown RBP15.38■□□□□ 0.05
DDX54-204ENST00000546898 E5RI56 91 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 S1PR4O95977 384 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 TPBGLP0DKB5 382 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 ST6GAL1P15907 406 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 UGT2B7P16662 529 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 CCNFP41002 786 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 SLC1A2P43004 574 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 ABRQ12979 859 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 CRYMQ14894 314 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 KIR2DS3Q14952 304 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 SLC5A12Q1EHB4 618 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 SPANXN3Q5MJ09 141 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 TTC23LQ6PF05 361 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 FBXO38Q6PIJ6 1188 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 KCNMB4Q86W47 210 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 DENND6AQ8IWF6 608 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 PDIK1LQ8N165 341 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 CFAP61Q8NHU2 1237 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 TTC9Q92623 222 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 RAD51AP1Q96B01 352 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 SNF8Q96H20 258 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 ELMO2Q96JJ3 720 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 SLC45A3Q96JT2 553 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 TRAPPC9Q96Q05 1148 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 NRTNQ99748 197 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 CCDC68Q9H2F9 335 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 COMMD10Q9Y6G5 202 aa15.38■□□□□ 0.05
DDX54-204ENST00000546898 A0A0J9YY10 115 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 LOC101059948A0A1B0GTJ6 334 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 ZNF891A8MT65 544 aaPredicted RBP15.37■□□□□ 0.05
DDX54-204ENST00000546898 TTI1O43156 1089 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 ITGB2P05107 769 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 WT1P19544 449 aaPredicted RBP15.37■□□□□ 0.05
DDX54-204ENST00000546898 CHRM3P20309 590 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms