RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 OR2AJ1Q8NGZ0 328 aa3.48□□□□□ -1.85
CCDC38-204ENST00000546816 FOXN4Q96NZ1 517 aa3.48□□□□□ -1.85
CCDC38-204ENST00000546816 KRT12Q99456 494 aa3.48□□□□□ -1.85
CCDC38-204ENST00000546816 PIGQQ9BRB3 760 aa3.48□□□□□ -1.85
CCDC38-204ENST00000546816 BTBD10Q9BSF8 475 aa3.48□□□□□ -1.85
CCDC38-204ENST00000546816 FTOQ9C0B1 505 aaKnown RBP eCLIP3.48□□□□□ -1.85
CCDC38-204ENST00000546816 S1PR5Q9H228 398 aa3.48□□□□□ -1.85
CCDC38-204ENST00000546816 SEPT11Q9NVA2 429 aaKnown RBP3.48□□□□□ -1.85
CCDC38-204ENST00000546816 ZNF69Q9UC07 566 aa3.48□□□□□ -1.85
CCDC38-204ENST00000546816 WDR37Q9Y2I8 494 aa3.48□□□□□ -1.85
CCDC38-204ENST00000546816 HYKKA2RU49 373 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 PI4KAP2A4QPH2 592 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.47□□□□□ -1.85
CCDC38-204ENST00000546816 TRIM49P0CI25 452 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 TRIM49CP0CI26 452 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 ACADMP11310 421 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 UGT1A4P22310 534 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 HADHAP40939 763 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 CXCL9Q07325 125 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 RIGQ13278 110 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 KRT33BQ14525 404 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 HLA-BQ31612 363 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 C2CD6Q53TS8 623 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 PAQR6Q6TCH4 344 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 PTAR1Q7Z6K3 402 aaPredicted RBP3.47□□□□□ -1.85
CCDC38-204ENST00000546816 LRRTM1Q86UE6 522 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 HOGA1Q86XE5 327 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 ERC1Q8IUD2 1116 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 TMEM139Q8IV31 216 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 CEP57L1Q8IYX8 460 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 FBXL16Q8N461 479 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 RAB42Q8N4Z0 105 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 OR5M8Q8NGP6 311 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 MOSPD2Q8NHP6 518 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 IRGQQ8WZA9 623 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 GTF3AQ92664 365 aaKnown RBP3.47□□□□□ -1.85
CCDC38-204ENST00000546816 NSMCE3Q96MG7 304 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 DPAGT1Q9H3H5 408 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 HRH4Q9H3N8 390 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 TUBE1Q9UJT0 475 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 ANGPTL3Q9Y5C1 460 aa3.47□□□□□ -1.85
CCDC38-204ENST00000546816 MYH15Q9Y2K3 1946 aa3.46□□□□□ -1.85
CCDC38-204ENST00000546816 LNP1A1A4G5 178 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 PGPEP1LA6NFU8 196 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 EPM2AB3EWF7 344 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 F5H0A9 414 aaPredicted RBP3.46□□□□□ -1.86
CCDC38-204ENST00000546816 XRCC3O43542 346 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 OR10H2O60403 315 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 MBD4O95243 580 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 WDPCPO95876 746 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 SLC6A6P31641 620 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 HERV-K104P61576 105 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 GRAPQ13588 217 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 ITPRIPL2Q3MIP1 535 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 PHLDA2Q53GA4 152 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 XKR3Q5GH77 459 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 CCDC70Q6NSX1 233 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 FIGLAQ6QHK4 219 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 FIP1L1Q6UN15 594 aaKnown RBP3.46□□□□□ -1.86
CCDC38-204ENST00000546816 LDB1Q86U70 411 aaPredicted RBP3.46□□□□□ -1.86
CCDC38-204ENST00000546816 COMMD2Q86X83 199 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 CDC20BQ86Y33 519 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 LMNTD2Q8IXW0 634 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 KIRREL3Q8IZU9 778 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 PITPNM3Q9BZ71 974 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 RTN4RQ9BZR6 473 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 KCNK15Q9H427 330 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 KRT84Q9NSB2 600 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 HACL1Q9UJ83 578 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 ZHX1Q9UKY1 873 aaPredicted RBP3.46□□□□□ -1.86
CCDC38-204ENST00000546816 PLAGL1Q9UM63 463 aa3.46□□□□□ -1.86
CCDC38-204ENST00000546816 ZNF541Q9H0D2 1346 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 LRRC72A6NJI9 287 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 SOCS3O14543 225 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 ZNF195O14628 629 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 PAPSS1O43252 624 aaPredicted RBP3.45□□□□□ -1.86
CCDC38-204ENST00000546816 RNASEH1O60930 286 aaKnown RBP3.45□□□□□ -1.86
CCDC38-204ENST00000546816 NXPH2O95156 264 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 IGHV4-31P0DP07 118 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 CYP2A7P20853 494 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 ACSL1P33121 698 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 OPRL1P41146 370 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 LEPRP48357 1165 aaKnown RBP3.45□□□□□ -1.86
CCDC38-204ENST00000546816 TMF1P82094 1093 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 TAF1BQ53T94 588 aaPredicted RBP3.45□□□□□ -1.86
CCDC38-204ENST00000546816 RSRC2Q7L4I2 434 aaKnown RBP3.45□□□□□ -1.86
CCDC38-204ENST00000546816 TTC39CQ8N584 583 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 PAPD5Q8NDF8 572 aaKnown RBP3.45□□□□□ -1.86
CCDC38-204ENST00000546816 PHLDA1Q8WV24 401 aaPredicted RBP3.45□□□□□ -1.86
CCDC38-204ENST00000546816 CENPTQ96BT3 561 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 LRRC61Q9BV99 259 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 UPF3AQ9H1J1 476 aaKnown RBP3.45□□□□□ -1.86
CCDC38-204ENST00000546816 CPVLQ9H3G5 476 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 FGF21Q9NSA1 209 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 PANK4Q9NVE7 773 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 EPHA6Q9UF33 1036 aa3.45□□□□□ -1.86
CCDC38-204ENST00000546816 SEC63Q9UGP8 760 aaKnown RBP3.45□□□□□ -1.86
CCDC38-204ENST00000546816 CCDC189A1A4V9 331 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 KPNA7A9QM74 516 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 PTP4A3O75365 173 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms