RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 TACR1P25103 407 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 ACTR3P61158 418 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 PSME3P61289 254 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 RIPK1Q13546 671 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 FLOT2Q14254 428 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 TTLL9Q3SXZ7 439 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 BNC2Q6ZN30 1099 aaPredicted RBP11.67□□□□□ -0.54
CCDC38-202ENST00000546386 CHSY3Q70JA7 882 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 LSRQ86X29 649 aaPredicted RBP11.67□□□□□ -0.54
CCDC38-202ENST00000546386 RGL4Q8IZJ4 473 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 OR10Q1Q8NGQ4 319 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 TSSK3Q96PN8 268 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 CCDC28BQ9BUN5 200 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 KLK8O60259 260 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 NRP2O60462 931 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 MLYCDO95822 493 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 CHEK2O96017 543 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 SRPRAP08240 638 aaKnown RBP11.67□□□□□ -0.54
CCDC38-202ENST00000546386 FGF4P08620 206 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 MTHFD1P11586 935 aaKnown RBP11.67□□□□□ -0.54
CCDC38-202ENST00000546386 PFKLP17858 780 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 COL9A1P20849 921 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 RPS3P23396 243 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC38-202ENST00000546386 FCHO2Q0JRZ9 810 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 FGL2Q14314 439 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 IMPG1Q17R60 797 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 CATSPEREQ5SY80 951 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 FAM91A1Q658Y4 838 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 SYTL1Q8IYJ3 562 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 MIER2Q8N344 545 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 CPA6Q8N4T0 437 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 GPR156Q8NFN8 814 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 CXorf40AQ8TE69 158 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 DTD2Q96FN9 168 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 AURKBQ96GD4 344 aaPredicted RBP11.67□□□□□ -0.54
CCDC38-202ENST00000546386 ZNF570Q96NI8 536 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 ZSCAN5AQ9BUG6 496 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 PARVBQ9HBI1 364 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 FBXL12Q9NXK8 326 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 NUDT4Q9NZJ9 180 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 SORCS3Q9UPU3 1222 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 TBC1D3DA0A087WVF3 549 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 TBC1D3IA0A087WXS9 549 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 TBC1D3EA0A087X179 549 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 TBC1D3KA0A087X1G2 549 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 ASPDHA6ND91 283 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 TBC1D3FA6NER0 549 aaPredicted RBP11.66□□□□□ -0.54
CCDC38-202ENST00000546386 TBC1D3LB9A6J9 549 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 STX16O14662 325 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 MAGEC1O60732 1142 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 ULK1O75385 1050 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 POP7O75817 140 aaKnown RBP11.66□□□□□ -0.54
CCDC38-202ENST00000546386 TBC1D3HP0C7X1 549 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 ANPEPP15144 967 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 CD22P20273 847 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 PXNP49023 591 aaPredicted RBP11.66□□□□□ -0.54
CCDC38-202ENST00000546386 FOXD4Q12950 439 aaPredicted RBP11.66□□□□□ -0.54
CCDC38-202ENST00000546386 TBCCQ15814 346 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 ITPRIPL2Q3MIP1 535 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 C6orf10Q5SRN2 563 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 TBC1D3GQ6DHY5 549 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 TBC1D3CQ6IPX1 549 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 ADGRG6Q86SQ4 1221 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 TBC1D3Q8IZP1 549 aaPredicted RBP11.66□□□□□ -0.54
CCDC38-202ENST00000546386 CLEC4FQ8N1N0 589 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 CPSF7Q8N684 471 aaKnown RBP11.66□□□□□ -0.54
CCDC38-202ENST00000546386 ZNF740Q8NDX6 193 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 ASZ1Q8WWH4 475 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 S1PR5Q9H228 398 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 DCLRE1BQ9H816 532 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 COPS7BQ9H9Q2 264 aaPredicted RBP11.66□□□□□ -0.54
CCDC38-202ENST00000546386 NMRK1Q9NWW6 199 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 C2orf42Q9NWW7 574 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 NDRG2Q9UN36 371 aaKnown RBP11.66□□□□□ -0.54
CCDC38-202ENST00000546386 DLGAP4Q9Y2H0 992 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 CFAP99D6REC4 459 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 H3BM21 787 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 K7EPI3 171 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 AREL1O15033 823 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 ANGPT2O15123 496 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 ZNF30P17039 623 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 GNAZP19086 355 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 MAP4P27816 1152 aaKnown RBP11.66□□□□□ -0.54
CCDC38-202ENST00000546386 MLLT3P42568 568 aaPredicted RBP11.66□□□□□ -0.54
CCDC38-202ENST00000546386 RAP1GDS1P52306 607 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 MTTPP55157 894 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 MTPNP58546 118 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 CHIT1Q13231 466 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 LRP8Q14114 963 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 SQLEQ14534 574 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 CST6Q15828 149 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 MUM1Q2TAK8 710 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 WSCD2Q2TBF2 565 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 PIP5KL1Q5T9C9 394 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 THEMIS2Q5TEJ8 643 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 ARHGAP24Q8N264 748 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 TRAM1L1Q8N609 369 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 DEFB119Q8N690 84 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 OR5AR1Q8NGP9 310 aa11.66□□□□□ -0.54
CCDC38-202ENST00000546386 PROKR1Q8TCW9 393 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 334.3 ms