RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 VPS37BQ9H9H4 285 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 FBXO6Q9NRD1 293 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 TM7SF3Q9NS93 570 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 IARS2Q9NSE4 1012 aaKnown RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 INTS10Q9NVR2 710 aaKnown RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 TRNAU1APQ9NX07 287 aaKnown RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 NINJ2Q9NZG7 142 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 SPASTQ9UBP0 616 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 REV1Q9UBZ9 1251 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 GNPTGQ9UJJ9 305 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 PRKAB1Q9Y478 270 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 LMO7DNF2Z398 122 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 F8W8V4 182 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 CDX4O14627 284 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-211ENST00000546304 KMOO15229 486 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 FFAR2O15552 330 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 FLRT2O43155 660 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 AQP9O43315 295 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 SGTAO43765 313 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 PCDHGA12O60330 932 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 NDUFS3O75489 264 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 AP2A2O94973 939 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 TNFP01375 233 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 C1QAP02745 245 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 FTH1P02794 183 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 ESR1P03372 595 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 FUCA1P04066 466 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 FAM153BP0C7A2 387 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 CTSEP14091 401 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 ATP1B2P14415 290 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-211ENST00000546304 VCLP18206 1134 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 RPS3P23396 243 aaKnown RBP eCLIP6.21□□□□□ -1.422e-7■■■□□ 17.7
PRKDC-211ENST00000546304 DGKAP23743 735 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 MCM3P25205 808 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 PHBP35232 272 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 ACTR1BP42025 376 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 ADARP55265 1226 aaKnown RBP6.21□□□□□ -1.42
PRKDC-211ENST00000546304 EIF3BP55884 814 aaKnown RBP6.21□□□□□ -1.42
PRKDC-211ENST00000546304 GPX6P59796 221 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 ACTR1AP61163 376 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 CTBP1Q13363 440 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 NAB1Q13506 487 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 SLMAPQ14BN4 828 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 EFTUD2Q15029 972 aaKnown RBP eCLIP6.21□□□□□ -1.42
PRKDC-211ENST00000546304 FAM153CQ494X1 144 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 ZNF789Q5FWF6 425 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 CTSL3PQ5NE16 218 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 UBAP2Q5T6F2 1119 aaKnown RBP6.21□□□□□ -1.42
PRKDC-211ENST00000546304 WDR93Q6P2C0 686 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 SLC30A9Q6PML9 568 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 CHST15Q7LFX5 561 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-211ENST00000546304 KANSL1Q7Z3B3 1105 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 C11orf96Q7Z7L8 435 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 GALNT7Q86SF2 657 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 SDCCAG8Q86SQ7 713 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-211ENST00000546304 LRRC6Q86X45 466 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 GATAD2AQ86YP4 633 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 PALM2Q8IXS6 379 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 FBXO27Q8NI29 283 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 HM13Q8TCT9 377 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 SAP25Q8TEE9 199 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.21□□□□□ -1.42
PRKDC-211ENST00000546304 CDKL2Q92772 493 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 FAM122AQ96E09 287 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 SGF29Q96ES7 293 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 P2RY12Q9H244 342 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 OSGEPL1Q9H4B0 414 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 UCKL1Q9NWZ5 548 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 NSMCE4AQ9NXX6 385 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 MOCS1Q9NZB8 636 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 ZNHIT2Q9UHR6 403 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 FBXO5Q9UKT4 447 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 KCNK6Q9Y257 313 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 PCDHB1Q9Y5F3 818 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 PCDHGB2Q9Y5G2 931 aa6.21□□□□□ -1.42
PRKDC-211ENST00000546304 SNRNP200O75643 2136 aaKnown RBP6.2□□□□□ -1.42
PRKDC-211ENST00000546304 UNC13CQ8NB66 2214 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-211ENST00000546304 KLHL33A6NCF5 533 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 NEMP2A6NFY4 417 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 FAM159BA6NKW6 160 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 C4orf47A7E2U8 309 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 PDZK1P1A8MUH7 402 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 B4DGG1 531 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 H3BMM5 538 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 H3BS24 57 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 RIPK2O43353 540 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 NIPSNAP2O75323 286 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 PIAS1O75925 651 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 ATE1O95260 518 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 ANXA6P08133 673 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 ABHD2P08910 425 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 GSTM1P09488 218 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 OR56A5P0C7T3 313 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 ALPPL2P10696 532 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 AK4P27144 223 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-211ENST00000546304 GRK6P43250 576 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 ABCG1P45844 678 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 CD151P48509 253 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 LIMK1P53667 647 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms