RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SRP72O76094 671 aaKnown RBP14.17□□□□□ -0.14
RTN3-214ENST00000545432 KLHL18O94889 574 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 PRAMEF1O95521 474 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 ZFXP17010 805 aaPredicted RBP14.17□□□□□ -0.14
RTN3-214ENST00000545432 CAPN3P20807 821 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 AGAP20933 346 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 AKT1P31749 480 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 GJC1P36383 396 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 MFAP5Q13361 173 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 MSLNQ13421 630 aaPredicted RBP14.17□□□□□ -0.14
RTN3-214ENST00000545432 PTPRCAPQ14761 206 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 INAQ16352 499 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 NKG7Q16617 165 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.17□□□□□ -0.14
RTN3-214ENST00000545432 MTFR2Q6P444 385 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 NPNTQ6UXI9 565 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 ISLR2Q6UXK2 745 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 MRGPRGQ86SM5 289 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 NXPE1Q8N323 547 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 ZNF655Q8N720 491 aaPredicted RBP14.17□□□□□ -0.14
RTN3-214ENST00000545432 ACBD4Q8NC06 268 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 PHC3Q8NDX5 983 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 CATSPER1Q8NEC5 780 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 BLOC1S5Q8TDH9 187 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 HEXDCQ8WVB3 486 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 POM121Q96HA1 1249 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 COG4Q9H9E3 785 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 MRM3Q9HC36 420 aaKnown RBP14.17□□□□□ -0.14
RTN3-214ENST00000545432 LMBRD1Q9NUN5 540 aa14.17□□□□□ -0.14
RTN3-214ENST00000545432 STX7O15400 261 aaKnown RBP14.16□□□□□ -0.14
RTN3-214ENST00000545432 TPBGLP0DKB5 382 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 COX6B1P14854 86 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 UGT2B7P16662 529 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 PDHA2P29803 388 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 CA7P43166 264 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 NR1I3Q14994 352 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 STX1AQ16623 288 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 UNC5AQ6ZN44 842 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 COX15Q7KZN9 410 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 SLC25A41Q8N5S1 370 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 OR11G2Q8NGC1 345 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 TFGQ92734 400 aaPredicted RBP14.16□□□□□ -0.14
RTN3-214ENST00000545432 HAS2Q92819 552 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 C14orf79Q96F83 325 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 RBM41Q96IZ5 413 aaKnown RBP14.16□□□□□ -0.14
RTN3-214ENST00000545432 NAP1L5Q96NT1 182 aaPredicted RBP14.16□□□□□ -0.14
RTN3-214ENST00000545432 XKR8Q9H6D3 395 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 ASB8Q9H765 288 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 TXLNGQ9NUQ3 528 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 PLCL2Q9UPR0 1127 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 ICKQ9UPZ9 632 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 NUP210LQ5VU65 1888 aa14.16□□□□□ -0.14
RTN3-214ENST00000545432 A0A0J9YY10 115 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 VSTM2BA6NLU5 285 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 IFRD1O00458 451 aaPredicted RBP14.15□□□□□ -0.14
RTN3-214ENST00000545432 SERPING1P05155 500 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 ATP1B2P14415 290 aaPredicted RBP14.15□□□□□ -0.14
RTN3-214ENST00000545432 NFKB1P19838 968 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 SSTR2P30874 369 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 SOX11P35716 441 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 NR2C2P49116 596 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 ARSFP54793 590 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 KCNK10P57789 538 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 MPP3Q13368 585 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 SLC9A5Q14940 896 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 TAF1AQ15573 450 aaPredicted RBP14.15□□□□□ -0.14
RTN3-214ENST00000545432 LRRC38Q5VT99 294 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 XKRXQ6PP77 449 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 SASS6Q6UVJ0 657 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 TRIM73Q86UV7 250 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 DENND1AQ8TEH3 1009 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 PSMF1Q92530 271 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 N4BP2L2Q92802 583 aaPredicted RBP14.15□□□□□ -0.14
RTN3-214ENST00000545432 ZNF285Q96NJ3 590 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 VAT1Q99536 393 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 NDC1Q9BTX1 674 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 SEMA3GQ9NS98 782 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 OR6C2Q9NZP2 312 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 CHMP5Q9NZZ3 219 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 SUCOQ9UBS9 1254 aaKnown RBP14.15□□□□□ -0.14
RTN3-214ENST00000545432 DCHS2Q6V1P9 2916 aa14.15□□□□□ -0.14
RTN3-214ENST00000545432 TRBV5-4A0A0C4DH59 114 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 A0A1B0GX78 115 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 A0A1W2PQ72 361 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 LRRD1A4D1F6 860 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 C5orf60A6NFR6 353 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 PRICKLE3O43900 615 aaPredicted RBP14.14□□□□□ -0.15
RTN3-214ENST00000545432 ALOX12BO75342 701 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 GSTM1P09488 218 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 RALBP11234 206 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 PIM1P11309 404 aaPredicted RBP14.14□□□□□ -0.15
RTN3-214ENST00000545432 ACADLP28330 430 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 SHMT2P34897 504 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 TMPRSS15P98073 1019 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 GSTM4Q03013 218 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 TAZQ16635 292 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 DEFB110Q30KQ9 67 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 TUBB8Q3ZCM7 444 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 IRAK1BP1Q5VVH5 260 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 RANBP10Q6VN20 620 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms