RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ZNF768Q9H5H4 540 aaKnown RBP18.56■□□□□ 0.56
DDX55-211ENST00000544429 CCDC86Q9H6F5 360 aaKnown RBP18.56■□□□□ 0.56
DDX55-211ENST00000544429 TAS2R13Q9NYV9 303 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 POMT2Q9UKY4 750 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 MATN2O00339 956 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 BTN3A1O00481 513 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 KIF1CO43896 1103 aaKnown RBP18.55■□□□□ 0.56
DDX55-211ENST00000544429 VPS26AO75436 327 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 PSIP1O75475 530 aaKnown RBP18.55■□□□□ 0.56
DDX55-211ENST00000544429 RPN2P04844 631 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 FGF3P11487 239 aaPredicted RBP18.55■□□□□ 0.56
DDX55-211ENST00000544429 ENO3P13929 434 aaPredicted RBP18.55■□□□□ 0.56
DDX55-211ENST00000544429 HGFP14210 728 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 FDXRP22570 491 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 SHMT2P34897 504 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 ETV5P41161 510 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 SKIV2L2P42285 1042 aaKnown RBP18.55■□□□□ 0.56
DDX55-211ENST00000544429 ERVPABLB-1P60509 514 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 KLHL38Q2WGJ6 581 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 TTLL9Q3SXZ7 439 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 CEP128Q6ZU80 1094 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 STRA8Q7Z7C7 330 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 CARFQ8N187 725 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 FLVCR1-AS1Q8TAF5 88 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 FMO2Q99518 471 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 OLFM1Q99784 485 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 FUT8Q9BYC5 575 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 RHOJQ9H4E5 214 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 SIDT1Q9NXL6 827 aaKnown RBP18.55■□□□□ 0.56
DDX55-211ENST00000544429 OR6C2Q9NZP2 312 aa18.55■□□□□ 0.56
DDX55-211ENST00000544429 MTRF1LQ9UGC7 380 aaKnown RBP18.55■□□□□ 0.56
DDX55-211ENST00000544429 RUVBL2Q9Y230 463 aaKnown RBP18.55■□□□□ 0.56
DDX55-211ENST00000544429 TLCD2A6NGC4 264 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 B4E171 279 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 GFYI3L273 518 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 TAF4O00268 1085 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 PIAS1O75925 651 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 MPC1LP0DKB6 136 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 CCL4P13236 92 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 ITIH1P19827 911 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 PKLRP30613 574 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 CCNFP41002 786 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 TSPAN7P41732 249 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 KPNA2P52292 529 aaKnown RBP18.54■□□□□ 0.56
DDX55-211ENST00000544429 ILF2Q12905 390 aaKnown RBP18.54■□□□□ 0.56
DDX55-211ENST00000544429 TBC1D25Q3MII6 688 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 HECTD2Q5U5R9 776 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 FAM45BPQ6NSW5 357 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 UGT3A1Q6NUS8 523 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 IRGCQ6NXR0 463 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 PROSER1Q86XN7 944 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 FBXO15Q8NCQ5 510 aaPredicted RBP18.54■□□□□ 0.56
DDX55-211ENST00000544429 FAM45AQ8TCE6 357 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 ASB11Q8WXH4 323 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 IFT81Q8WYA0 676 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 SLC41A2Q96JW4 573 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 ZNF578Q96N58 590 aaPredicted RBP18.54■□□□□ 0.56
DDX55-211ENST00000544429 PITPNM3Q9BZ71 974 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 XKR8Q9H6D3 395 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 ACSL6Q9UKU0 697 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 VWA7Q9Y334 891 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 PCDHGA7Q9Y5G6 932 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 AK5Q9Y6K8 562 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 USP24Q9UPU5 2620 aa18.54■□□□□ 0.56
DDX55-211ENST00000544429 ZZEF1O43149 2961 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 IGHV5-51A0A0C4DH38 117 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 A8MU76 341 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 TNFSF15O95150 251 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 TSPAN12O95859 305 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 POLR2CP19387 275 aaPredicted RBP18.53■□□□□ 0.56
DDX55-211ENST00000544429 STX2P32856 288 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 CSTF2P33240 577 aaKnown RBP eCLIP18.53■□□□□ 0.56
DDX55-211ENST00000544429 RAB28P51157 221 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 KBTBD12Q3ZCT8 623 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 CCSMST1Q4G0I0 132 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.53■□□□□ 0.56
DDX55-211ENST00000544429 SNAP47Q5SQN1 464 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 UBAP2Q5T6F2 1119 aaKnown RBP18.53■□□□□ 0.56
DDX55-211ENST00000544429 PAQR3Q6TCH7 311 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 FAM92BQ6ZTR7 304 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 IFT20Q8IY31 132 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 CPNE9Q8IYJ1 553 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 LINC01555Q8NAE3 123 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 CFAP61Q8NHU2 1237 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 SNIP1Q8TAD8 396 aaKnown RBP18.53■□□□□ 0.56
DDX55-211ENST00000544429 HMGCLL1Q8TB92 370 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 DENND1AQ8TEH3 1009 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 FBF1Q8TES7 1133 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 ZCCHC14Q8WYQ9 949 aaKnown RBP18.53■□□□□ 0.56
DDX55-211ENST00000544429 UBXN4Q92575 508 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 CDKL2Q92772 493 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 RAD51AP1Q96B01 352 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 MAP3K3Q99759 626 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 CPNE1Q99829 537 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 ZMYND15Q9H091 742 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 OCIAD1Q9NX40 245 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 NINJ2Q9NZG7 142 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 KLHL3Q9UH77 587 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 TRMT6Q9UJA5 497 aaKnown RBP18.53■□□□□ 0.56
DDX55-211ENST00000544429 PLAGL1Q9UM63 463 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms