RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 XRCC3O43542 346 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 NARSO43776 548 aaKnown RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 FCGR3BO75015 233 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 ACSL3O95573 720 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 SBK2P0C263 348 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 OR2T7P0C7T2 308 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 SPP1P10451 314 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 CD22P20273 847 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 PIGAP37287 484 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 AVPR1AP37288 418 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 PRPHP41219 470 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 ACAA2P42765 397 aaKnown RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 COMPP49747 757 aaPredicted RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 GMPSP49915 693 aaPredicted RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 UCP2P55851 309 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 CSNK2A1P68400 391 aaPredicted RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 HMGN5P82970 282 aaKnown RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 CFHR1Q03591 330 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 PRKCZQ05513 592 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 DPTQ07507 201 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 DMTNQ08495 405 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 UBE2V1Q13404 147 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 TNK1Q13470 666 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 ZNF169Q14929 603 aaPredicted RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 LSM12Q3MHD2 195 aaKnown RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 FAM174BQ3ZCQ3 159 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 MIDNQ504T8 468 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 EARS2Q5JPH6 523 aaKnown RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 TCTE1Q5JU00 501 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 SPOUT1Q5T280 376 aaKnown RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 FRG2Q64ET8 278 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 IGFL4Q6B9Z1 124 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 LCN10Q6JVE6 187 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 PRR27Q6MZM9 219 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 PODNL1Q6PEZ8 512 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 Q6YL49 198 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 FAM57BQ71RH2 274 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 MEPCEQ7L2J0 689 aaKnown RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 TRAPPC11Q7Z392 1133 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 PIGWQ7Z7B1 504 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 DEFB132Q7Z7B7 95 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 EXOC3L1Q86VI1 746 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 ZNF410Q86VK4 478 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 DSELQ8IZU8 1212 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 KDM8Q8N371 416 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 ANKRD13CQ8N6S4 541 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 EMC1Q8N766 993 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 ZNF611Q8N823 705 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 PAPD5Q8NDF8 572 aaKnown RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 CSNK2A3Q8NEV1 391 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 FBXO30Q8TB52 745 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 SPATA18Q8TC71 538 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 CACTINQ8WUQ7 758 aaKnown RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 UBLCP1Q8WVY7 318 aaPredicted RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 ZNF606Q8WXB4 792 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 MAP4K1Q92918 833 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 EME1Q96AY2 570 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 MOB3AQ96BX8 217 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 ORAI1Q96D31 301 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 GRAMD2BQ96HH9 432 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 SPATA13Q96N96 652 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 KCNK16Q96T55 309 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 PKP2Q99959 881 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 SEMA3CQ99985 751 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 HAUS8Q9BT25 410 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 LSG1Q9H089 658 aaKnown RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 KLHL31Q9H511 634 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 MYNNQ9NPC7 610 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 SLC2A4RGQ9NR83 387 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 PNPLA3Q9NST1 481 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 SPASTQ9UBP0 616 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 SERGEFQ9UGK8 458 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 EXOC7Q9UPT5 735 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 PADI2Q9Y2J8 665 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 EPN1Q9Y6I3 576 aaPredicted RBP3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 TONSLQ96HA7 1378 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 NINLQ9Y2I6 1382 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 ELOVL7A1L3X0 281 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 DUXAA6NLW8 204 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 KBTBD13C9JR72 458 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 TO15178 435 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 CTDSPLO15194 276 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 SPINT2O43291 252 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 PEX11AO75192 247 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 GLCEO94923 617 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 ETS1P14921 441 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 MPZP25189 248 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 RPA1P27694 616 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 PSMB4P28070 264 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 SFNP31947 248 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 PPP3CCP48454 512 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 SERPINH1P50454 418 aaKnown RBP3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 SOX10P56693 466 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 C1QTNF8P60827 252 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 KCNJ10P78508 379 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 SIM1P81133 766 aaPredicted RBP3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 FOLH1Q04609 750 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 FOXM1Q08050 763 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 FOXI1Q12951 378 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 STIM1Q13586 685 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms