RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 CIDEBQ9UHD4 219 aa10.76□□□□□ -0.69
SCG3-202ENST00000542355 LNPEPQ9UIQ6 1025 aa10.76□□□□□ -0.69
SCG3-202ENST00000542355 CKAP5Q14008 2032 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 MGAT4DA6NG13 374 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 ARHGEF33A8MVX0 844 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 CHUKO15111 745 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 HNRNPCL1O60812 293 aaKnown RBP10.75□□□□□ -0.69
SCG3-202ENST00000542355 OTCP00480 354 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 CAPN1P07384 714 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 CHRNB1P11230 501 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 NQO1P15559 274 aaKnown RBP10.75□□□□□ -0.69
SCG3-202ENST00000542355 EPB42P16452 691 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 GABRG2P18507 467 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 PTPN4P29074 926 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 HNMTP50135 292 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 CCNG1P51959 295 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 PKNOX1P55347 436 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 AP1S2P56377 157 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 KLF10Q13118 480 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 MAP7D1Q3KQU3 841 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.75□□□□□ -0.69
SCG3-202ENST00000542355 SCIMPQ6UWF3 145 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 FAM83HQ6ZRV2 1179 aaPredicted RBP10.75□□□□□ -0.69
SCG3-202ENST00000542355 LARP4Q71RC2 724 aaKnown RBP eCLIP10.75□□□□□ -0.69
SCG3-202ENST00000542355 MILR1Q7Z6M3 343 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 AMZ2Q86W34 360 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 TCAIMQ8N3R3 496 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 DEFB123Q8N688 67 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 POU5F2Q8N7G0 328 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 UBTD2Q8WUN7 234 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 C1QTNF7Q9BXJ2 289 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 RBCK1Q9BYM8 510 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 ATG10Q9H0Y0 220 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 SLC32A1Q9H598 525 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 AKTIPQ9H8T0 292 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 TM7SF3Q9NS93 570 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 SLC23A2Q9UGH3 650 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 ZNHIT2Q9UHR6 403 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 CFAP73A6NFT4 308 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 B2RBV5 119 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 LOC730098B7Z3J9 87 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 CHEK2O96017 543 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 CATP04040 527 aaKnown RBP10.75□□□□□ -0.69
SCG3-202ENST00000542355 CD1EP15812 388 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 GGT5P36269 586 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 SFSWAPQ12872 951 aaKnown RBP10.75□□□□□ -0.69
SCG3-202ENST00000542355 PTCHD3Q3KNS1 767 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 CCSMST1Q4G0I0 132 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 TCHHL1Q5QJ38 904 aaPredicted RBP10.75□□□□□ -0.69
SCG3-202ENST00000542355 NEK5Q6P3R8 708 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 XKR5Q6UX68 686 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 RINLQ6ZS11 566 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 LRRTM4Q86VH4 590 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 RASGRP3Q8IV61 690 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 C10orf67Q8IYJ2 551 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 METTL6Q8TCB7 284 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 TBC1D10AQ9BXI6 508 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 BTBD1Q9H0C5 482 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 LMAN1LQ9HAT1 526 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 PHPT1Q9NRX4 125 aaPredicted RBP10.75□□□□□ -0.69
SCG3-202ENST00000542355 TAS2R1Q9NYW7 299 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 FBXO9Q9UK97 447 aaPredicted RBP10.75□□□□□ -0.69
SCG3-202ENST00000542355 DUSP12Q9UNI6 340 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 SLC22A14Q9Y267 594 aa10.75□□□□□ -0.69
SCG3-202ENST00000542355 COL4A2P08572 1712 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 UBDO15205 165 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 GYG2O15488 501 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 DKK1O94907 266 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 WDR47O94967 919 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 FUCA1P04066 466 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 IGFALSP35858 605 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 BDKRB1P46663 353 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 PLOD1Q02809 727 aaPredicted RBP10.74□□□□□ -0.69
SCG3-202ENST00000542355 NAA25Q14CX7 972 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 METTL2BQ6P1Q9 378 aaKnown RBP10.74□□□□□ -0.69
SCG3-202ENST00000542355 CHSY3Q70JA7 882 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 CPSF7Q8N684 471 aaKnown RBP10.74□□□□□ -0.69
SCG3-202ENST00000542355 HM13Q8TCT9 377 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 TUBGCP3Q96CW5 907 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 CMTM5Q96DZ9 223 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 BTBD10Q9BSF8 475 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.74□□□□□ -0.69
SCG3-202ENST00000542355 GEMIN8Q9NWZ8 242 aaKnown RBP10.74□□□□□ -0.69
SCG3-202ENST00000542355 GIMAP2Q9UG22 337 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 EBF1Q9UH73 591 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 STK38LQ9Y2H1 464 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 COPG1Q9Y678 874 aaKnown RBP10.74□□□□□ -0.69
SCG3-202ENST00000542355 PIKFYVEQ9Y2I7 2098 aa10.74□□□□□ -0.69
SCG3-202ENST00000542355 C1orf105O95561 183 aa10.73□□□□□ -0.69
SCG3-202ENST00000542355 KRT16P08779 473 aa10.73□□□□□ -0.69
SCG3-202ENST00000542355 MYCLP1P12525 358 aaPredicted RBP10.73□□□□□ -0.69
SCG3-202ENST00000542355 ITPKAP23677 461 aa10.73□□□□□ -0.69
SCG3-202ENST00000542355 PIK3R1P27986 724 aa10.73□□□□□ -0.69
SCG3-202ENST00000542355 TEAD1P28347 426 aa10.73□□□□□ -0.69
SCG3-202ENST00000542355 CLDN2P57739 230 aa10.73□□□□□ -0.69
SCG3-202ENST00000542355 TRAF3Q13114 568 aa10.73□□□□□ -0.69
SCG3-202ENST00000542355 CHST15Q7LFX5 561 aaPredicted RBP10.73□□□□□ -0.69
SCG3-202ENST00000542355 MYLK4Q86YV6 388 aaPredicted RBP10.73□□□□□ -0.69
SCG3-202ENST00000542355 SNX31Q8N9S9 440 aa10.73□□□□□ -0.69
SCG3-202ENST00000542355 FBXO27Q8NI29 283 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms